RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 SRGAP3O43295 1099 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 UFL1O94874 794 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 CHRNDQ07001 517 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 FBXO3Q9UK99 471 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 LEMD3Q9Y2U8 911 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 RIPOR2Q9Y4F9 1068 aa23.39■■□□□ 1.33
CENPA-204ENST00000460030 SHTN1A0MZ66 631 aa23.38■■□□□ 1.33
CENPA-204ENST00000460030 FMR1Q06787 632 aaKnown RBP eCLIP23.38■■□□□ 1.33
CENPA-204ENST00000460030 TNIP1Q15025 636 aa23.38■■□□□ 1.33
CENPA-204ENST00000460030 USP50Q70EL3 339 aaPredicted RBP23.38■■□□□ 1.33
CENPA-204ENST00000460030 EYA3Q99504 573 aa23.38■■□□□ 1.33
CENPA-204ENST00000460030 COPRSQ9NQ92 184 aa23.38■■□□□ 1.33
CENPA-204ENST00000460030 ADARB2Q9NS39 739 aaKnown RBP23.38■■□□□ 1.33
CENPA-204ENST00000460030 ZBTB12Q9Y330 459 aaPredicted RBP23.38■■□□□ 1.33
CENPA-204ENST00000460030 PSMD14O00487 310 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 ECE2O60344 883 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 ATP8B2P98198 1209 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 KLHDC4Q8TBB5 520 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 PUS3Q9BZE2 481 aaKnown RBP23.37■■□□□ 1.33
CENPA-204ENST00000460030 C1orf115Q9H7X2 142 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 KCNQ5Q9NR82 932 aa23.37■■□□□ 1.33
CENPA-204ENST00000460030 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
CENPA-204ENST00000460030 EYA2O00167 538 aa23.36■■□□□ 1.33
CENPA-204ENST00000460030 TMEM88BA6NKF7 163 aa23.35■■□□□ 1.33
CENPA-204ENST00000460030 CIAO1O76071 339 aa23.35■■□□□ 1.33
CENPA-204ENST00000460030 LRRC24Q50LG9 513 aa23.35■■□□□ 1.33
CENPA-204ENST00000460030 ZC3H12CQ9C0D7 883 aaKnown RBP23.35■■□□□ 1.33
CENPA-204ENST00000460030 ZNF804BA4D1E1 1349 aa23.34■■□□□ 1.33
CENPA-204ENST00000460030 PNMA6EA0A0J9YXQ4 647 aa23.34■■□□□ 1.33
CENPA-204ENST00000460030 WTIPA6NIX2 430 aaPredicted RBP23.34■■□□□ 1.33
CENPA-204ENST00000460030 TRPM4Q8TD43 1214 aa23.34■■□□□ 1.33
CENPA-204ENST00000460030 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
CENPA-204ENST00000460030 SPEF2Q9C093 1822 aa23.33■■□□□ 1.33
CENPA-204ENST00000460030 TRAF5O00463 557 aa23.33■■□□□ 1.33
CENPA-204ENST00000460030 POLA2Q14181 598 aa23.33■■□□□ 1.33
CENPA-204ENST00000460030 CEP85Q6P2H3 762 aa23.33■■□□□ 1.33
CENPA-204ENST00000460030 MICALL2Q8IY33 904 aa23.33■■□□□ 1.33
CENPA-204ENST00000460030 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.33
CENPA-204ENST00000460030 CNOT7Q9UIV1 285 aaKnown RBP23.33■■□□□ 1.33
CENPA-204ENST00000460030 SUPT16HQ9Y5B9 1047 aaKnown RBP23.33■■□□□ 1.33
CENPA-204ENST00000460030 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
CENPA-204ENST00000460030 TAF5LO75529 589 aa23.32■■□□□ 1.32
CENPA-204ENST00000460030 KCNJ4P48050 445 aa23.32■■□□□ 1.32
CENPA-204ENST00000460030 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
CENPA-204ENST00000460030 METTL24Q5JXM2 366 aa23.32■■□□□ 1.32
CENPA-204ENST00000460030 ATG9AQ7Z3C6 839 aa23.32■■□□□ 1.32
CENPA-204ENST00000460030 RPAP2Q8IXW5 612 aaPredicted RBP23.32■■□□□ 1.32
CENPA-204ENST00000460030 PA2G4Q9UQ80 394 aaKnown RBP23.32■■□□□ 1.32
CENPA-204ENST00000460030 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
CENPA-204ENST00000460030 G3V3G9 751 aa23.31■■□□□ 1.32
CENPA-204ENST00000460030 IL15P40933 162 aaPredicted RBP23.31■■□□□ 1.32
CENPA-204ENST00000460030 DCAF8Q5TAQ9 597 aa23.31■■□□□ 1.32
CENPA-204ENST00000460030 SIL1Q9H173 461 aa23.31■■□□□ 1.32
CENPA-204ENST00000460030 PDE8BO95263 885 aa23.3■■□□□ 1.32
CENPA-204ENST00000460030 UBE4AQ14139 1066 aa23.3■■□□□ 1.32
CENPA-204ENST00000460030 C15orf52Q6ZUT6 534 aaKnown RBP23.3■■□□□ 1.32
CENPA-204ENST00000460030 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
CENPA-204ENST00000460030 SCN9AQ15858 1988 aa23.3■■□□□ 1.32
CENPA-204ENST00000460030 H7C1D1 291 aa23.28■■□□□ 1.32
CENPA-204ENST00000460030 EGFRP00533 1210 aa23.28■■□□□ 1.32
CENPA-204ENST00000460030 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
CENPA-204ENST00000460030 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
CENPA-204ENST00000460030 TBC1D10BQ4KMP7 808 aaPredicted RBP23.28■■□□□ 1.32
CENPA-204ENST00000460030 SAMD7Q7Z3H4 446 aa23.28■■□□□ 1.32
CENPA-204ENST00000460030 DPF2Q92785 391 aa23.28■■□□□ 1.32
CENPA-204ENST00000460030 GLIS2Q9BZE0 524 aaPredicted RBP23.28■■□□□ 1.32
CENPA-204ENST00000460030 CEP126Q9P2H0 1117 aa23.28■■□□□ 1.32
CENPA-204ENST00000460030 SNAP23O00161 211 aa23.27■■□□□ 1.32
CENPA-204ENST00000460030 CRBNQ96SW2 442 aa23.27■■□□□ 1.32
CENPA-204ENST00000460030 ABT1Q9ULW3 272 aaKnown RBP23.27■■□□□ 1.32
CENPA-204ENST00000460030 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
CENPA-204ENST00000460030 IRS2Q9Y4H2 1338 aa23.27■■□□□ 1.32
CENPA-204ENST00000460030 HMMRO75330 724 aa23.26■■□□□ 1.31
CENPA-204ENST00000460030 VEGFBP49765 207 aa23.26■■□□□ 1.31
CENPA-204ENST00000460030 G3BP1Q13283 466 aaKnown RBP eCLIP23.26■■□□□ 1.31
CENPA-204ENST00000460030 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
CENPA-204ENST00000460030 TXNRD3Q86VQ6 643 aa23.26■■□□□ 1.31
CENPA-204ENST00000460030 COA1Q9GZY4 146 aa23.26■■□□□ 1.31
CENPA-204ENST00000460030 VIL1P09327 827 aaKnown RBP23.25■■□□□ 1.31
CENPA-204ENST00000460030 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
CENPA-204ENST00000460030 KLRK1P26718 216 aa23.25■■□□□ 1.31
CENPA-204ENST00000460030 AAMPQ13685 434 aa23.25■■□□□ 1.31
CENPA-204ENST00000460030 RBM26Q5T8P6 1007 aaKnown RBP23.25■■□□□ 1.31
CENPA-204ENST00000460030 PODNQ7Z5L7 613 aa23.25■■□□□ 1.31
CENPA-204ENST00000460030 SIRT2Q8IXJ6 389 aa23.25■■□□□ 1.31
CENPA-204ENST00000460030 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
CENPA-204ENST00000460030 FGFR2P21802 821 aa23.24■■□□□ 1.31
CENPA-204ENST00000460030 CST9Q5W186 159 aa23.24■■□□□ 1.31
CENPA-204ENST00000460030 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
CENPA-204ENST00000460030 RASSF10A6NK89 507 aa23.23■■□□□ 1.31
CENPA-204ENST00000460030 DLK2Q6UY11 383 aa23.23■■□□□ 1.31
CENPA-204ENST00000460030 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
CENPA-204ENST00000460030 LPIN2Q92539 896 aa23.23■■□□□ 1.31
CENPA-204ENST00000460030 IFIT1P09914 478 aaKnown RBP23.22■■□□□ 1.31
CENPA-204ENST00000460030 DEFB115Q30KQ5 88 aa23.22■■□□□ 1.31
CENPA-204ENST00000460030 RSBN1LQ6PCB5 846 aaPredicted RBP23.22■■□□□ 1.31
CENPA-204ENST00000460030 ZNF408Q9H9D4 720 aa23.22■■□□□ 1.31
CENPA-204ENST00000460030 CELF2O95319 508 aaKnown RBP23.21■■□□□ 1.31
CENPA-204ENST00000460030 KIF4BQ2VIQ3 1234 aa23.21■■□□□ 1.31
CENPA-204ENST00000460030 ZNF804AQ7Z570 1209 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms