RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 MYH3P11055 1940 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
USP39-210ENST00000459775 MX1P20591 662 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 CHRNDQ07001 517 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
USP39-210ENST00000459775 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
USP39-210ENST00000459775 A0A1B0GUL7 405 aa12.63□□□□□ -0.39
USP39-210ENST00000459775 IFIT2P09913 472 aaKnown RBP12.63□□□□□ -0.39
USP39-210ENST00000459775 SRGNP10124 158 aa12.63□□□□□ -0.39
USP39-210ENST00000459775 CDC5LQ99459 802 aaKnown RBP12.63□□□□□ -0.39
USP39-210ENST00000459775 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
USP39-210ENST00000459775 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
USP39-210ENST00000459775 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
USP39-210ENST00000459775 TGFB2P61812 414 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 DNAJC5GQ8N7S2 189 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP39-210ENST00000459775 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
USP39-210ENST00000459775 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 KLRK1P26718 216 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 FSTL1Q12841 308 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 GRAPQ13588 217 aa12.62□□□□□ -0.39
USP39-210ENST00000459775 GRAPLQ8TC17 118 aaPredicted RBP12.62□□□□□ -0.39
USP39-210ENST00000459775 PDE8BO95263 885 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
USP39-210ENST00000459775 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
USP39-210ENST00000459775 SPEF2Q9C093 1822 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 UTRNP46939 3433 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 PDE6BP35913 854 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 PI4K2BQ8TCG2 481 aa12.61□□□□□ -0.39
USP39-210ENST00000459775 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
USP39-210ENST00000459775 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
USP39-210ENST00000459775 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
USP39-210ENST00000459775 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
USP39-210ENST00000459775 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
USP39-210ENST00000459775 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
USP39-210ENST00000459775 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
USP39-210ENST00000459775 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 PI16Q6UXB8 463 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 BOLA2Q9H3K6 86 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 MROH5Q6ZUA9 1318 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 ZNF609O15014 1411 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 H0YIN7 160 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 DPEP1P16444 411 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 STAP2Q9UGK3 403 aa12.59□□□□□ -0.39
USP39-210ENST00000459775 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
USP39-210ENST00000459775 RAD21O60216 631 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 NPR1P16066 1061 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 SDSP20132 328 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 FGFR2P21802 821 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 GPSM2P81274 684 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 SCARF1Q14162 830 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
USP39-210ENST00000459775 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
USP39-210ENST00000459775 CHGBP05060 677 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 KCNA3P22001 575 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 PHKA1P46020 1223 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 GYG1P46976 350 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 MASTLQ96GX5 879 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
USP39-210ENST00000459775 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
USP39-210ENST00000459775 BCAMP50895 628 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
USP39-210ENST00000459775 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
USP39-210ENST00000459775 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
USP39-210ENST00000459775 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 SEC24BO95487 1268 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 PTMAP06454 111 aaKnown RBP12.56□□□□□ -0.4
USP39-210ENST00000459775 PRELPP51888 382 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 AKAP2Q9Y2D5 859 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 MAFGO15525 162 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 BBOX1O75936 387 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 LPIN2Q92539 896 aa12.56□□□□□ -0.4
USP39-210ENST00000459775 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
USP39-210ENST00000459775 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 KCNJ4P48050 445 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 ANTXR1Q9H6X2 564 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
USP39-210ENST00000459775 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
USP39-210ENST00000459775 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms