RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IFIT5Q13325 482 aaKnown RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 DNTTIP2Q5QJE6 756 aaKnown RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 ZBTB38Q8NAP3 1195 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 TDRD7Q8NHU6 1098 aaKnown RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 APPBP2Q92624 585 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 NAT10Q9H0A0 1025 aaKnown RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 DACT1Q9NYF0 836 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
HDAC3-202ENST00000459727 STRCP1A6NGW2 1772 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 ATRNO75882 1429 aa10.38□□□□□ -0.75
HDAC3-202ENST00000459727 MAST3O60307 1309 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 PTPDC1A2A3K4 754 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 E7EWF7 191 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 KINO60870 393 aaKnown RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 CDKL5O76039 1030 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 HSPD1P10809 573 aaKnown RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 SCRN1Q12765 414 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 STX1AQ16623 288 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 NSUN7Q8NE18 718 aaKnown RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 ABCA3Q99758 1704 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-202ENST00000459727 CARMIL3Q8ND23 1372 aa10.37□□□□□ -0.75
HDAC3-202ENST00000459727 ZMYM6O95789 1325 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 SALL1Q9NSC2 1324 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 A0A1W2PQ27 194 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 A0A1W2PQ64 194 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 A0A1W2PQD8 194 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 CSF1RP07333 972 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 UQCRHP07919 91 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 EVA1CP58658 441 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 STK3Q13188 491 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
HDAC3-202ENST00000459727 SARM1Q6SZW1 724 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 KCNG4Q8TDN1 519 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 CABLES1Q8TDN4 633 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 EDC3Q96F86 508 aaKnown RBP10.36□□□□□ -0.75
HDAC3-202ENST00000459727 ANO10Q9NW15 660 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
HDAC3-202ENST00000459727 MAP3K15Q6ZN16 1313 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 YEATS4O95619 227 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 LIG1P18858 919 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.75
HDAC3-202ENST00000459727 TPM4P67936 248 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 FAM160A1Q05DH4 1040 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 TRDNQ13061 729 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
HDAC3-202ENST00000459727 TTLL7Q6ZT98 887 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 MYRIPQ8NFW9 859 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
HDAC3-202ENST00000459727 SHANK3Q9BYB0 1731 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 ANKRD18BA2A2Z9 1011 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 ERVV-1B6SEH8 477 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 JAK2O60674 1132 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 A1BGP04217 495 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 PDIA3P30101 505 aaKnown RBP10.34□□□□□ -0.75
HDAC3-202ENST00000459727 ZNF165P49910 485 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 ATP2B3Q16720 1220 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 ANO6Q4KMQ2 910 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 GIGYF2Q6Y7W6 1299 aaKnown RBP10.34□□□□□ -0.75
HDAC3-202ENST00000459727 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 CEP57L1Q8IYX8 460 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 TCEANC2Q96MN5 208 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 NOL10Q9BSC4 688 aaKnown RBP10.34□□□□□ -0.75
HDAC3-202ENST00000459727 RTEL1Q9NZ71 1219 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 PLCH1Q4KWH8 1693 aa10.34□□□□□ -0.75
HDAC3-202ENST00000459727 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 ZNF213O14771 459 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 CPLX1O14810 134 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 NRDCO43847 1150 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 TIMM10P62072 90 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 UBE3CQ15386 1083 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 WASHC4Q2M389 1173 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 STOX1Q6ZVD7 989 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 DDX54Q8TDD1 881 aaKnown RBP10.33□□□□□ -0.76
HDAC3-202ENST00000459727 UBE2Q2Q8WVN8 375 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 MRPS27Q92552 414 aaKnown RBP10.33□□□□□ -0.76
HDAC3-202ENST00000459727 XAGE2Q96GT9 111 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 MRFAP1L1Q96HT8 127 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 TMEM87BQ96K49 555 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 SEC62Q99442 399 aaKnown RBP10.33□□□□□ -0.76
HDAC3-202ENST00000459727 MTA3Q9BTC8 594 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 CBX8Q9HC52 389 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 POLR3EQ9NVU0 708 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 LRP5O75197 1615 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms