RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
DDX39B-214ENST00000458640 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 ANXA1P04083 346 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 LRCH2Q5VUJ6 765 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 EFCAB13Q8IY85 973 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 TBC1D22AQ8WUA7 517 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 SRRTQ9BXP5 876 aaKnown RBP13.25□□□□□ -0.29
DDX39B-214ENST00000458640 DCTPP1Q9H773 170 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 LIG1P18858 919 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 CORO7P57737 925 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 ZKSCAN8Q15776 578 aaPredicted RBP13.24□□□□□ -0.29
DDX39B-214ENST00000458640 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
DDX39B-214ENST00000458640 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 MSL3Q8N5Y2 521 aaKnown RBP13.24□□□□□ -0.29
DDX39B-214ENST00000458640 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 MAP3K2Q9Y2U5 619 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
DDX39B-214ENST00000458640 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 PDIA6Q15084 440 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 EP400NLQ6ZTU2 488 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
DDX39B-214ENST00000458640 SGSM2O43147 1006 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 AP5Z1O43299 807 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 DDB1Q16531 1140 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 C11orf91Q3C1V1 193 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
DDX39B-214ENST00000458640 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
DDX39B-214ENST00000458640 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.23□□□□□ -0.29
DDX39B-214ENST00000458640 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
DDX39B-214ENST00000458640 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-214ENST00000458640 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
DDX39B-214ENST00000458640 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-214ENST00000458640 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
DDX39B-214ENST00000458640 MYL6BP14649 208 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 ERCC3P19447 782 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
DDX39B-214ENST00000458640 BCL9O00512 1426 aa13.21□□□□□ -0.29
DDX39B-214ENST00000458640 EIF3CLB5ME19 914 aaKnown RBP13.21□□□□□ -0.29
DDX39B-214ENST00000458640 C21orf2O43822 256 aa13.21□□□□□ -0.29
DDX39B-214ENST00000458640 KCNJ6P48051 423 aa13.21□□□□□ -0.29
DDX39B-214ENST00000458640 ZNF75DP51815 510 aa13.21□□□□□ -0.29
DDX39B-214ENST00000458640 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
DDX39B-214ENST00000458640 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
DDX39B-214ENST00000458640 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
DDX39B-214ENST00000458640 A0A087WUV0 522 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ANAPC15P60006 121 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 OAS2P29728 719 aaKnown RBP13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ST5P78524 1137 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 C8orf37Q96NL8 207 aa13.2□□□□□ -0.3
DDX39B-214ENST00000458640 AFDNP55196 1824 aaKnown RBP13.19□□□□□ -0.3
DDX39B-214ENST00000458640 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-214ENST00000458640 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
DDX39B-214ENST00000458640 PIGBQ92521 554 aa13.19□□□□□ -0.3
DDX39B-214ENST00000458640 SGSM3Q96HU1 749 aa13.19□□□□□ -0.3
DDX39B-214ENST00000458640 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
DDX39B-214ENST00000458640 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
DDX39B-214ENST00000458640 VPS72Q15906 364 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
DDX39B-214ENST00000458640 TDRD7Q8NHU6 1098 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms