RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 DACT2Q5SW24 774 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 GREM2Q9H772 168 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 PDE4DIPQ5VU43 2346 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 MYH3P11055 1940 aa13.41□□□□□ -0.26
HDLBP-227ENST00000458564 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
HDLBP-227ENST00000458564 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
HDLBP-227ENST00000458564 STRIP1Q5VSL9 837 aa13.41□□□□□ -0.26
HDLBP-227ENST00000458564 COA1Q9GZY4 146 aa13.41□□□□□ -0.26
HDLBP-227ENST00000458564 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-227ENST00000458564 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 CTU1Q7Z7A3 348 aaKnown RBP13.4□□□□□ -0.26
HDLBP-227ENST00000458564 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
HDLBP-227ENST00000458564 H7C1W4 665 aa13.39□□□□□ -0.27
HDLBP-227ENST00000458564 WNT10BO00744 389 aa13.39□□□□□ -0.27
HDLBP-227ENST00000458564 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
HDLBP-227ENST00000458564 NBPF9Q3BBW0 867 aa13.39□□□□□ -0.27
HDLBP-227ENST00000458564 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
HDLBP-227ENST00000458564 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
HDLBP-227ENST00000458564 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
HDLBP-227ENST00000458564 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
HDLBP-227ENST00000458564 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
HDLBP-227ENST00000458564 CASP7P55210 303 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 GCKRQ14397 625 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
HDLBP-227ENST00000458564 TWISTNBQ3B726 338 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-227ENST00000458564 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
HDLBP-227ENST00000458564 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-227ENST00000458564 MXD3Q9BW11 206 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 IL16Q14005 1332 aa13.37□□□□□ -0.27
HDLBP-227ENST00000458564 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-227ENST00000458564 HTTP42858 3142 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 CSF1RP07333 972 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 ITGA6P23229 1130 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 NF2P35240 595 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 TM4SF4P48230 202 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 G2E3Q7L622 706 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 APOBEC3FQ8IUX4 373 aaKnown RBP13.36□□□□□ -0.27
HDLBP-227ENST00000458564 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
HDLBP-227ENST00000458564 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
HDLBP-227ENST00000458564 SASH1O94885 1247 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 KLRK1P26718 216 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 SOX10P56693 466 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 FLIIQ13045 1269 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-227ENST00000458564 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 IRS2Q9Y4H2 1338 aa13.35□□□□□ -0.27
HDLBP-227ENST00000458564 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-227ENST00000458564 LDLRAD1Q5T700 205 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 C15orf52Q6ZUT6 534 aaKnown RBP13.34□□□□□ -0.27
HDLBP-227ENST00000458564 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
HDLBP-227ENST00000458564 CHRNDQ07001 517 aa13.33□□□□□ -0.28
HDLBP-227ENST00000458564 ARMC9Q7Z3E5 817 aa13.33□□□□□ -0.28
HDLBP-227ENST00000458564 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
HDLBP-227ENST00000458564 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
HDLBP-227ENST00000458564 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
HDLBP-227ENST00000458564 GPR25O00155 361 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 GTF2IP78347 998 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 PTPN12Q05209 780 aaKnown RBP13.32□□□□□ -0.28
HDLBP-227ENST00000458564 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-227ENST00000458564 MAP3K11Q16584 847 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 CD209Q9NNX6 404 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 PPP2R3BQ9Y5P8 575 aa13.32□□□□□ -0.28
HDLBP-227ENST00000458564 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
HDLBP-227ENST00000458564 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 KCNJ4P48050 445 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 SPRYD7Q5W111 196 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 CERS5Q8N5B7 392 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 SSC5DA1L4H1 1573 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
HDLBP-227ENST00000458564 CENPFP49454 3210 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 LAMB1P07942 1786 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 ALDH1A1P00352 501 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 IL1R1P14778 569 aa13.3□□□□□ -0.28
HDLBP-227ENST00000458564 FKBP1AP62942 108 aaKnown RBP13.3□□□□□ -0.28
HDLBP-227ENST00000458564 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms