RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 CDC37L1Q7L3B6 337 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 OSBP2Q969R2 916 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 TSPY26PQ9H489 355 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 LTBP4Q8N2S1 1624 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 NWD2Q9ULI1 1742 aa19.77■□□□□ 0.75
CCDC43-202ENST00000457422 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 ESPNB1AK53 854 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 LETM1O95202 739 aaPredicted RBP19.76■□□□□ 0.75
CCDC43-202ENST00000457422 EXOSC10Q01780 885 aaKnown RBP19.76■□□□□ 0.75
CCDC43-202ENST00000457422 VGLL2Q8N8G2 317 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 AK7Q96M32 723 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 LRRC2Q9BYS8 371 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 ARAP2Q8WZ64 1704 aa19.76■□□□□ 0.75
CCDC43-202ENST00000457422 A0A0G2JS52 829 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
CCDC43-202ENST00000457422 DDB1Q16531 1140 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
CCDC43-202ENST00000457422 SLIT2O94813 1529 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 E7EWF7 191 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 PFKFB2O60825 505 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 ZAP70P43403 619 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 EIF5P55010 431 aaKnown RBP19.75■□□□□ 0.75
CCDC43-202ENST00000457422 KRT85P78386 507 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 BRF1Q92994 677 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 CNNM1Q9NRU3 951 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 ELP1O95163 1332 aa19.75■□□□□ 0.75
CCDC43-202ENST00000457422 PI16Q6UXB8 463 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 JAK2O60674 1132 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 TPRNQ4KMQ1 711 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 FBXL16Q8N461 479 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 SMARCC2Q8TAQ2 1214 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 APPBP2Q92624 585 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 ACSBG1Q96GR2 724 aa19.74■□□□□ 0.75
CCDC43-202ENST00000457422 HS1BP3Q53T59 392 aa19.73■□□□□ 0.75
CCDC43-202ENST00000457422 INTS5Q6P9B9 1019 aaKnown RBP19.73■□□□□ 0.75
CCDC43-202ENST00000457422 FERMT3Q86UX7 667 aa19.73■□□□□ 0.75
CCDC43-202ENST00000457422 CTNNA3Q9UI47 895 aa19.73■□□□□ 0.75
CCDC43-202ENST00000457422 FGD1P98174 961 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 SCRN1Q12765 414 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 WASHC4Q2M389 1173 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 CCDC87Q9NVE4 849 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 ATRNO75882 1429 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 FOXP2O15409 715 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 PDE8BO95263 885 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 TTLL5Q6EMB2 1281 aa19.72■□□□□ 0.75
CCDC43-202ENST00000457422 MARCH10Q8NA82 808 aaPredicted RBP19.72■□□□□ 0.75
CCDC43-202ENST00000457422 DDX60Q8IY21 1712 aaKnown RBP19.72■□□□□ 0.75
CCDC43-202ENST00000457422 MCAMP43121 646 aa19.71■□□□□ 0.75
CCDC43-202ENST00000457422 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
CCDC43-202ENST00000457422 LAMB2P55268 1798 aa19.71■□□□□ 0.75
CCDC43-202ENST00000457422 CRKLP46109 303 aaKnown RBP19.71■□□□□ 0.75
CCDC43-202ENST00000457422 TTC6Q86TZ1 520 aa19.71■□□□□ 0.75
CCDC43-202ENST00000457422 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 ZSCAN25Q6NSZ9 544 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 RNF214Q8ND24 703 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.7■□□□□ 0.74
CCDC43-202ENST00000457422 SCAND2PQ9GZW5 306 aaPredicted RBP19.7■□□□□ 0.74
CCDC43-202ENST00000457422 SPATA31A5Q5VU36 1347 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 MROH5Q6ZUA9 1318 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 SPATA31A7Q8IWB4 1347 aa19.7■□□□□ 0.74
CCDC43-202ENST00000457422 MYH14Q7Z406 1995 aaKnown RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 MYH15Q9Y2K3 1946 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 ARID4AP29374 1257 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 APOBRQ0VD83 1088 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 TTF1Q15361 905 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 FAM173BQ6P4H8 233 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 NSUN7Q8NE18 718 aaKnown RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 CHMP4CQ96CF2 233 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 ZNF274Q96GC6 653 aaPredicted RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 SIK1P57059 783 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 EVCP57679 992 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 IMMTQ16891 758 aaKnown RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
CCDC43-202ENST00000457422 PUS7LQ9H0K6 701 aaKnown RBP19.69■□□□□ 0.74
CCDC43-202ENST00000457422 MYO5AQ9Y4I1 1855 aaKnown RBP19.68■□□□□ 0.74
CCDC43-202ENST00000457422 ZNF831Q5JPB2 1677 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 ADD2P35612 726 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 RESTQ13127 1097 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 ITPK1Q13572 414 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 BARGINQ6ZT62 677 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-202ENST00000457422 COL5A3P25940 1745 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-202ENST00000457422 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
CCDC43-202ENST00000457422 FGAP02671 866 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 HCLS1P14317 486 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-202ENST00000457422 FGFR2P21802 821 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 PUM3Q15397 648 aaKnown RBP19.67■□□□□ 0.74
CCDC43-202ENST00000457422 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 FAM177BA6PVY3 158 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 GPAA1O43292 621 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 CAMTA2O94983 1202 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 CTDNEP1O95476 244 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms