RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 C15orf52Q6ZUT6 534 aaKnown RBP28.95■■■□□ 2.22
CBX3-204ENST00000456948 ZNF804AQ7Z570 1209 aa28.95■■■□□ 2.22
CBX3-204ENST00000456948 CNTROBQ8N137 903 aa28.95■■■□□ 2.22
CBX3-204ENST00000456948 CLUAP1Q96AJ1 413 aa28.95■■■□□ 2.22
CBX3-204ENST00000456948 WTIPA6NIX2 430 aaPredicted RBP28.94■■■□□ 2.22
CBX3-204ENST00000456948 ZC3H15Q8WU90 426 aaKnown RBP28.94■■■□□ 2.22
CBX3-204ENST00000456948 RIPOR2Q9Y4F9 1068 aa28.94■■■□□ 2.22
CBX3-204ENST00000456948 MS4A1P11836 297 aa28.93■■■□□ 2.22
CBX3-204ENST00000456948 METTL24Q5JXM2 366 aa28.93■■■□□ 2.22
CBX3-204ENST00000456948 FBXW7Q969H0 707 aa28.93■■■□□ 2.22
CBX3-204ENST00000456948 LRRFIP2Q9Y608 721 aaKnown RBP28.93■■■□□ 2.22
CBX3-204ENST00000456948 MYO3BQ8WXR4 1341 aa28.93■■■□□ 2.22
CBX3-204ENST00000456948 STRIP1Q5VSL9 837 aa28.92■■■□□ 2.22
CBX3-204ENST00000456948 MAP1SQ66K74 1059 aaPredicted RBP28.92■■■□□ 2.22
CBX3-204ENST00000456948 MEIS3Q99687 375 aa28.92■■■□□ 2.22
CBX3-204ENST00000456948 FBXO3Q9UK99 471 aa28.92■■■□□ 2.22
CBX3-204ENST00000456948 MMP14P50281 582 aa28.91■■■□□ 2.22
CBX3-204ENST00000456948 TTLL5Q6EMB2 1281 aa28.91■■■□□ 2.22
CBX3-204ENST00000456948 TXNRD3Q86VQ6 643 aa28.91■■■□□ 2.22
CBX3-204ENST00000456948 PUS3Q9BZE2 481 aaKnown RBP28.91■■■□□ 2.22
CBX3-204ENST00000456948 DZIP1LQ8IYY4 767 aaKnown RBP28.9■■■□□ 2.22
CBX3-204ENST00000456948 OGFOD1Q8N543 542 aa28.9■■■□□ 2.22
CBX3-204ENST00000456948 CD209Q9NNX6 404 aa28.9■■■□□ 2.22
CBX3-204ENST00000456948 GNAI2P04899 355 aa28.89■■■□□ 2.22
CBX3-204ENST00000456948 USP17L8P0C7I0 530 aa28.89■■■□□ 2.22
CBX3-204ENST00000456948 EYA2O00167 538 aa28.88■■■□□ 2.21
CBX3-204ENST00000456948 VPS37DQ86XT2 251 aa28.88■■■□□ 2.21
CBX3-204ENST00000456948 SCN9AQ15858 1988 aa28.88■■■□□ 2.21
CBX3-204ENST00000456948 PDE8BO95263 885 aa28.87■■■□□ 2.21
CBX3-204ENST00000456948 ITGBL1O95965 494 aaPredicted RBP28.87■■■□□ 2.21
CBX3-204ENST00000456948 KLRK1P26718 216 aa28.87■■■□□ 2.21
CBX3-204ENST00000456948 LRRC24Q50LG9 513 aa28.87■■■□□ 2.21
CBX3-204ENST00000456948 TMEM57Q8N5G2 664 aa28.87■■■□□ 2.21
CBX3-204ENST00000456948 CREBZFQ9NS37 354 aa28.87■■■□□ 2.21
CBX3-204ENST00000456948 ZNF609O15014 1411 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 SNAP23O00161 211 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 PTPN12Q05209 780 aaKnown RBP28.86■■■□□ 2.21
CBX3-204ENST00000456948 CAVIN4Q5BKX8 364 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 RBM26Q5T8P6 1007 aaKnown RBP28.86■■■□□ 2.21
CBX3-204ENST00000456948 SAMD7Q7Z3H4 446 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 KLHDC4Q8TBB5 520 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 PGAP2Q9UHJ9 254 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 PASKQ96RG2 1323 aa28.86■■■□□ 2.21
CBX3-204ENST00000456948 ADAMTSL1Q8N6G6 1762 aa28.85■■■□□ 2.21
CBX3-204ENST00000456948 HIBADHP31937 336 aaKnown RBP28.85■■■□□ 2.21
CBX3-204ENST00000456948 GTF2IP78347 998 aa28.85■■■□□ 2.21
CBX3-204ENST00000456948 TBC1D10BQ4KMP7 808 aaPredicted RBP28.85■■■□□ 2.21
CBX3-204ENST00000456948 DACT2Q5SW24 774 aa28.85■■■□□ 2.21
CBX3-204ENST00000456948 HDAC9Q9UKV0 1011 aa28.85■■■□□ 2.21
CBX3-204ENST00000456948 CIAO1O76071 339 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 IFIT1P09914 478 aaKnown RBP28.84■■■□□ 2.21
CBX3-204ENST00000456948 IL1R1P14778 569 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 RFX5P48382 616 aaPredicted RBP28.84■■■□□ 2.21
CBX3-204ENST00000456948 ZNF280AP59817 542 aaPredicted RBP28.84■■■□□ 2.21
CBX3-204ENST00000456948 KIF4BQ2VIQ3 1234 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 ITPRIPQ8IWB1 547 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 JMYQ8N9B5 988 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 TRPM4Q8TD43 1214 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 PSME4Q14997 1843 aa28.84■■■□□ 2.21
CBX3-204ENST00000456948 TMEM88BA6NKF7 163 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 SRGAP3O43295 1099 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 PUM3Q15397 648 aaKnown RBP28.83■■■□□ 2.21
CBX3-204ENST00000456948 CDC37L1Q7L3B6 337 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 DCPSQ96C86 337 aaKnown RBP28.83■■■□□ 2.21
CBX3-204ENST00000456948 GMLQ99445 158 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 CEP126Q9P2H0 1117 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 RCAN3Q9UKA8 241 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 TNNQ9UQP3 1299 aa28.83■■■□□ 2.21
CBX3-204ENST00000456948 SHTN1A0MZ66 631 aa28.82■■■□□ 2.2
CBX3-204ENST00000456948 IL15P40933 162 aaPredicted RBP28.82■■■□□ 2.2
CBX3-204ENST00000456948 HIRAP54198 1017 aaPredicted RBP28.82■■■□□ 2.2
CBX3-204ENST00000456948 MKRN1Q9UHC7 482 aaKnown RBP28.82■■■□□ 2.2
CBX3-204ENST00000456948 IRS2Q9Y4H2 1338 aa28.81■■■□□ 2.2
CBX3-204ENST00000456948 SASH1O94885 1247 aa28.81■■■□□ 2.2
CBX3-204ENST00000456948 MTX1Q13505 466 aa28.81■■■□□ 2.2
CBX3-204ENST00000456948 SIL1Q9H173 461 aa28.81■■■□□ 2.2
CBX3-204ENST00000456948 COPRSQ9NQ92 184 aa28.81■■■□□ 2.2
CBX3-204ENST00000456948 A0A1B0GUL6 1792 aa28.8■■■□□ 2.2
CBX3-204ENST00000456948 FRAT2O75474 233 aaPredicted RBP28.8■■■□□ 2.2
CBX3-204ENST00000456948 SLC5A1P13866 664 aa28.8■■■□□ 2.2
CBX3-204ENST00000456948 MYOZ2Q9NPC6 264 aa28.8■■■□□ 2.2
CBX3-204ENST00000456948 FKBP1AP62942 108 aaKnown RBP28.79■■■□□ 2.2
CBX3-204ENST00000456948 VGLL2Q8N8G2 317 aa28.79■■■□□ 2.2
CBX3-204ENST00000456948 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.79■■■□□ 2.2
CBX3-204ENST00000456948 LPIN2Q92539 896 aa28.79■■■□□ 2.2
CBX3-204ENST00000456948 FAM84BQ96KN1 310 aaPredicted RBP28.79■■■□□ 2.2
CBX3-204ENST00000456948 GYG1P46976 350 aa28.78■■■□□ 2.2
CBX3-204ENST00000456948 TDRD7Q8NHU6 1098 aaKnown RBP28.77■■■□□ 2.2
CBX3-204ENST00000456948 CHMP4BQ9H444 224 aaKnown RBP28.77■■■□□ 2.2
CBX3-204ENST00000456948 ATG9AQ7Z3C6 839 aa28.76■■■□□ 2.19
CBX3-204ENST00000456948 FBXO33Q7Z6M2 555 aa28.76■■■□□ 2.19
CBX3-204ENST00000456948 KIAA0825Q8IV33 1275 aa28.76■■■□□ 2.19
CBX3-204ENST00000456948 SULF1Q8IWU6 871 aa28.76■■■□□ 2.19
CBX3-204ENST00000456948 MXD3Q9BW11 206 aa28.76■■■□□ 2.19
CBX3-204ENST00000456948 SCARF1Q14162 830 aa28.75■■■□□ 2.19
CBX3-204ENST00000456948 KRT26Q7Z3Y9 468 aa28.75■■■□□ 2.19
CBX3-204ENST00000456948 GLIS2Q9BZE0 524 aaPredicted RBP28.75■■■□□ 2.19
CBX3-204ENST00000456948 PA2G4Q9UQ80 394 aaKnown RBP28.74■■■□□ 2.19
CBX3-204ENST00000456948 FAM205AQ6ZU69 1335 aa28.73■■■□□ 2.19
CBX3-204ENST00000456948 ZBTB7BO15156 539 aaPredicted RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms