RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	PARD3	Q8TEW0	1356 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.99	□□□□□ -0.17	2e-19	■■■■■ 288.6
NEDD4L-208	ENST00000456173	CHML	P26374	656 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TSNAXIP1	Q2TAA8	658 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CCDC170	Q8IYT3	715 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	IGSF22	Q8N9C0	903 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	VCX	Q9H320	206 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CEP126	Q9P2H0	1117 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	UBXN1	Q04323	297 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SPAG1	Q07617	926 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SNCB	Q16143	134 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TTC14	Q96N46	770 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SAMM50	Q9Y512	469 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	MTX1	Q13505	466 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CCDC40	Q4G0X9	1142 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CNGA4	Q8IV77	575 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	RHPN1	Q8TCX5	695 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	NAP1L3	Q99457	506 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	PHAX	Q9H814	394 aa	Known RBP	13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	STK38L	Q9Y2H1	464 aa		13.99	□□□□□ -0.17
NEDD4L-208	ENST00000456173	ZNF213	O14771	459 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	FGFR1OP	O95684	399 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	MAGEA9	P43362	315 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	MMS22L	Q6ZRQ5	1243 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	RNASE9	P60153	205 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	IK	Q13123	557 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	C8orf74	Q6P047	294 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	INTS8	Q75QN2	995 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	HOOK3	Q86VS8	718 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	ARHGAP45	Q92619	1136 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	STMN2	Q93045	179 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SELENOO	Q9BVL4	669 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	EID1	Q9Y6B2	187 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	PNMA6A	P0CW24	399 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	FAM71B	Q8TC56	605 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TMX4	Q9H1E5	349 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	GBP1	P32455	592 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CCT6A	P40227	531 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TUBB2A	Q13885	445 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CACNA2D3	Q8IZS8	1091 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	LEO1	Q8WVC0	666 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TUBB2B	Q9BVA1	445 aa		13.98	□□□□□ -0.17
NEDD4L-208	ENST00000456173	KLF18	A0A0U1RQI7	1052 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SLC8A1	P32418	973 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	LONRF2	Q1L5Z9	754 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	AIDA	Q96BJ3	306 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SLC26A6	Q9BXS9	759 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TRIM7	Q9C029	511 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	STMN4	Q9H169	189 aa	Predicted RBP	13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	BICC1	Q9H694	974 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	FAM83G	A6ND36	823 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SMIM24	O75264	130 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CLTA	P09496	248 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	ARID5A	Q03989	594 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SMARCC2	Q8TAQ2	1214 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	EXOC4	Q96A65	974 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	DHX58	Q96C10	678 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	MRFAP1L1	Q96HT8	127 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	UBA5	Q9GZZ9	404 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	PTPRC	P08575	1304 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CD2BP2	O95400	341 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CETN2	P41208	172 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	FLII	Q13045	1269 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	DESI2	Q9BSY9	194 aa		13.97	□□□□□ -0.17
NEDD4L-208	ENST00000456173	STAMBP	O95630	424 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	KRT13	P13646	458 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	FAM114A1	Q8IWE2	563 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CACTIN	Q8WUQ7	758 aa	Known RBP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	PSMB7	Q99436	277 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TTF2	Q9UNY4	1162 aa	Known RBP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	IFIT3	O14879	490 aa	Known RBP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	HINFP	Q9BQA5	517 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	ALG1	Q9BT22	464 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CDK19	Q9BWU1	502 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	MMRN2	Q9H8L6	949 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	IFIT1	P09914	478 aa	Known RBP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	METAP2	P50579	478 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	TCERG1L	Q5VWI1	586 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CEP128	Q6ZU80	1094 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	CCDC25	Q86WR0	208 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	SMC6	Q96SB8	1091 aa		13.96	□□□□□ -0.17
NEDD4L-208	ENST00000456173	RAPGEF4	Q8WZA2	1011 aa		13.96	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SECISBP2L	Q93073	1101 aa	Known RBP	13.96	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RPUSD2	Q8IZ73	545 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	FBXO18	Q8NFZ0	1043 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	HOMER2	Q9NSB8	354 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	EIF3CL	B5ME19	914 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	ADK	P55263	362 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	FAM212A	Q96EL1	285 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	EIF3C	Q99613	913 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	TRIM4	Q9C037	500 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RPRD2	Q5VT52	1461 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	RUFY3	Q7L099	469 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MRPL50	Q8N5N7	158 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	GBP5	Q96PP8	586 aa		13.95	□□□□□ -0.18
NEDD4L-208	ENST00000456173	MED4	Q9NPJ6	270 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms