RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 WWC1Q8IX03 1113 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
PSMC4-202ENST00000455878 SLC10A3P09131 477 aa17.08■□□□□ 0.32
PSMC4-202ENST00000455878 GMLQ99445 158 aa17.08■□□□□ 0.32
PSMC4-202ENST00000455878 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
PSMC4-202ENST00000455878 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
PSMC4-202ENST00000455878 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
PSMC4-202ENST00000455878 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
PSMC4-202ENST00000455878 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 NF2P35240 595 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 MMP14P50281 582 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
PSMC4-202ENST00000455878 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 GREM2Q9H772 168 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
PSMC4-202ENST00000455878 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
PSMC4-202ENST00000455878 MPHOSPH8Q99549 860 aa17.05■□□□□ 0.32
PSMC4-202ENST00000455878 ANKRD2Q9GZV1 360 aa17.05■□□□□ 0.32
PSMC4-202ENST00000455878 MYO3BQ8WXR4 1341 aa17.05■□□□□ 0.32
PSMC4-202ENST00000455878 COL4A1P02462 1669 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
PSMC4-202ENST00000455878 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
PSMC4-202ENST00000455878 NBPF9Q3BBW0 867 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
PSMC4-202ENST00000455878 HDAC9Q9UKV0 1011 aa17.04■□□□□ 0.32
PSMC4-202ENST00000455878 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
PSMC4-202ENST00000455878 H7C1W4 665 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 KCNJ4P48050 445 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 DACT2Q5SW24 774 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 RASAL3Q86YV0 1011 aa17.03■□□□□ 0.32
PSMC4-202ENST00000455878 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
PSMC4-202ENST00000455878 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
PSMC4-202ENST00000455878 CTU1Q7Z7A3 348 aaKnown RBP17.02■□□□□ 0.32
PSMC4-202ENST00000455878 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
PSMC4-202ENST00000455878 MXD3Q9BW11 206 aa17.02■□□□□ 0.32
PSMC4-202ENST00000455878 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
PSMC4-202ENST00000455878 ZNF609O15014 1411 aa17.02■□□□□ 0.32
PSMC4-202ENST00000455878 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
PSMC4-202ENST00000455878 WNT10BO00744 389 aa17.01■□□□□ 0.31
PSMC4-202ENST00000455878 GCKRQ14397 625 aa17.01■□□□□ 0.31
PSMC4-202ENST00000455878 MOB2Q70IA6 237 aa17.01■□□□□ 0.31
PSMC4-202ENST00000455878 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
PSMC4-202ENST00000455878 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
PSMC4-202ENST00000455878 ITGA6P23229 1130 aa17■□□□□ 0.31
PSMC4-202ENST00000455878 G2E3Q7L622 706 aa17■□□□□ 0.31
PSMC4-202ENST00000455878 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
PSMC4-202ENST00000455878 IL16Q14005 1332 aa17■□□□□ 0.31
PSMC4-202ENST00000455878 GTF2IP78347 998 aa16.99■□□□□ 0.31
PSMC4-202ENST00000455878 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
PSMC4-202ENST00000455878 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
PSMC4-202ENST00000455878 PLA2G12BQ9BX93 195 aa16.99■□□□□ 0.31
PSMC4-202ENST00000455878 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 TM4SF4P48230 202 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 FLIIQ13045 1269 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 APOBEC3FQ8IUX4 373 aaKnown RBP16.98■□□□□ 0.31
PSMC4-202ENST00000455878 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
PSMC4-202ENST00000455878 SASH1O94885 1247 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 SLC34A2O95436 690 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 CSF1RP07333 972 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 SOX10P56693 466 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 SREBF2Q12772 1141 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 PRKG1Q13976 671 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 LINS1Q8NG48 757 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
PSMC4-202ENST00000455878 CHRNDQ07001 517 aa16.96■□□□□ 0.31
PSMC4-202ENST00000455878 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
PSMC4-202ENST00000455878 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
PSMC4-202ENST00000455878 DLGAP5Q15398 846 aa16.96■□□□□ 0.31
PSMC4-202ENST00000455878 E9PSI1 815 aa16.96■□□□□ 0.3
PSMC4-202ENST00000455878 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.3
PSMC4-202ENST00000455878 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.3
PSMC4-202ENST00000455878 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.3
PSMC4-202ENST00000455878 CD209Q9NNX6 404 aa16.96■□□□□ 0.3
PSMC4-202ENST00000455878 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.3
PSMC4-202ENST00000455878 MYO1BO43795 1136 aa16.95■□□□□ 0.3
PSMC4-202ENST00000455878 SLC10A4Q96EP9 437 aa16.95■□□□□ 0.3
PSMC4-202ENST00000455878 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
PSMC4-202ENST00000455878 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
PSMC4-202ENST00000455878 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 GPR25O00155 361 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 PPP1R12BO60237 982 aaPredicted RBP16.94■□□□□ 0.3
PSMC4-202ENST00000455878 TAF5LO75529 589 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 KLRK1P26718 216 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 INHBEP58166 350 aa16.94■□□□□ 0.3
PSMC4-202ENST00000455878 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
PSMC4-202ENST00000455878 DEFB129Q9H1M3 183 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms