RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 PODNQ7Z5L7 613 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 AGBL3Q8NEM8 1001 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 ZNF804BA4D1E1 1349 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 AOC2O75106 756 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 DACT2Q5SW24 774 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 MRPL50Q8N5N7 158 aaKnown RBP15.15■□□□□ 0.02
PDGFB-204ENST00000455790 HELBQ8NG08 1087 aaPredicted RBP15.15■□□□□ 0.02
PDGFB-204ENST00000455790 AIDAQ96BJ3 306 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 ZNF594Q96JF6 807 aaPredicted RBP15.15■□□□□ 0.02
PDGFB-204ENST00000455790 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 IRS2Q9Y4H2 1338 aa15.15■□□□□ 0.02
PDGFB-204ENST00000455790 E9PSI1 815 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 TAF5LO75529 589 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 ALDH1L1O75891 902 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 ECE1P42892 770 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
PDGFB-204ENST00000455790 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
PDGFB-204ENST00000455790 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 SUCLG2Q96I99 432 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 ANKRD2Q9GZV1 360 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
PDGFB-204ENST00000455790 CTCFP49711 727 aaPredicted RBP15.13■□□□□ 0.01
PDGFB-204ENST00000455790 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
PDGFB-204ENST00000455790 SCARF1Q14162 830 aa15.13■□□□□ 0.01
PDGFB-204ENST00000455790 ANGEL2Q5VTE6 544 aaKnown RBP15.13■□□□□ 0.01
PDGFB-204ENST00000455790 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
PDGFB-204ENST00000455790 MYOZ2Q9NPC6 264 aa15.13■□□□□ 0.01
PDGFB-204ENST00000455790 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
PDGFB-204ENST00000455790 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
PDGFB-204ENST00000455790 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
PDGFB-204ENST00000455790 HSPA8P11142 646 aaKnown RBP15.12■□□□□ 0.01
PDGFB-204ENST00000455790 KCNJ4P48050 445 aa15.12■□□□□ 0.01
PDGFB-204ENST00000455790 LBX1P52954 281 aa15.12■□□□□ 0.01
PDGFB-204ENST00000455790 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
PDGFB-204ENST00000455790 CAPN15O75808 1086 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 HUNKP57058 714 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
PDGFB-204ENST00000455790 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 SULF1Q8IWU6 871 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 CDCA5Q96FF9 252 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 HHIPL1Q96JK4 782 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 ZIC5Q96T25 663 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 GBA2Q9HCG7 927 aaPredicted RBP15.11■□□□□ 0.01
PDGFB-204ENST00000455790 UTYO14607 1347 aa15.11■□□□□ 0.01
PDGFB-204ENST00000455790 GTF2IP78347 998 aa15.1■□□□□ 0.01
PDGFB-204ENST00000455790 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
PDGFB-204ENST00000455790 NBPF9Q3BBW0 867 aa15.1■□□□□ 0.01
PDGFB-204ENST00000455790 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
PDGFB-204ENST00000455790 PRDM10Q9NQV6 1147 aa15.1■□□□□ 0.01
PDGFB-204ENST00000455790 PLIN1O60240 522 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 SASH1O94885 1247 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 C15orf52Q6ZUT6 534 aaKnown RBP15.09■□□□□ 0.01
PDGFB-204ENST00000455790 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 ANKRD44Q8N8A2 993 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 PUS3Q9BZE2 481 aaKnown RBP15.09■□□□□ 0.01
PDGFB-204ENST00000455790 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
PDGFB-204ENST00000455790 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 PTPRCP08575 1304 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
PDGFB-204ENST00000455790 MAP2K2P36507 400 aa15.08■□□□□ 0
PDGFB-204ENST00000455790 TRMT2AQ8IZ69 625 aaKnown RBP15.08■□□□□ 0
PDGFB-204ENST00000455790 CERS5Q8N5B7 392 aa15.08■□□□□ 0
PDGFB-204ENST00000455790 CNNM1Q9NRU3 951 aa15.08■□□□□ 0
PDGFB-204ENST00000455790 JAG2Q9Y219 1238 aa15.08■□□□□ 0
PDGFB-204ENST00000455790 PITPNM2Q9BZ72 1349 aa15.08■□□□□ 0
PDGFB-204ENST00000455790 FAM155AB1AL88 458 aaPredicted RBP15.07■□□□□ 0
PDGFB-204ENST00000455790 CCER2I3L3R5 266 aa15.07■□□□□ 0
PDGFB-204ENST00000455790 WNT10BO00744 389 aa15.07■□□□□ 0
PDGFB-204ENST00000455790 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
PDGFB-204ENST00000455790 PRAMEF18Q5VWM3 479 aa15.07■□□□□ 0
PDGFB-204ENST00000455790 C2orf69Q8N8R5 385 aa15.07■□□□□ 0
PDGFB-204ENST00000455790 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
PDGFB-204ENST00000455790 RGMBQ6NW40 437 aa15.06■□□□□ 0
PDGFB-204ENST00000455790 OGFOD1Q8N543 542 aa15.06■□□□□ 0
PDGFB-204ENST00000455790 PCDHAC2Q9Y5I4 1007 aa15.06■□□□□ 0
PDGFB-204ENST00000455790 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
PDGFB-204ENST00000455790 IL1R1P14778 569 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
PDGFB-204ENST00000455790 NOGQ13253 232 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 MOB2Q70IA6 237 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ -0
PDGFB-204ENST00000455790 BEGAINQ9BUH8 593 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 USP44Q9H0E7 712 aa15.05■□□□□ -0
PDGFB-204ENST00000455790 AOX1Q06278 1338 aa15.04■□□□□ -0
PDGFB-204ENST00000455790 GYG1P46976 350 aa15.04■□□□□ -0
PDGFB-204ENST00000455790 ZNF157P51786 506 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms