RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 WNT10BO00744 389 aa30.05■■■□□ 2.4
PTPRA-208ENST00000455631 FKTNO75072 461 aa30.05■■■□□ 2.4
PTPRA-208ENST00000455631 CDC5LQ99459 802 aaKnown RBP30.05■■■□□ 2.4
PTPRA-208ENST00000455631 WTIPA6NIX2 430 aaPredicted RBP30.04■■■□□ 2.4
PTPRA-208ENST00000455631 WDR43Q15061 677 aaKnown RBP eCLIP30.04■■■□□ 2.4
PTPRA-208ENST00000455631 DACT2Q5SW24 774 aa30.04■■■□□ 2.4
PTPRA-208ENST00000455631 MYO3BQ8WXR4 1341 aa30.03■■■□□ 2.4
PTPRA-208ENST00000455631 SASH1O94885 1247 aa30.03■■■□□ 2.4
PTPRA-208ENST00000455631 PRKG1Q13976 671 aa30.03■■■□□ 2.4
PTPRA-208ENST00000455631 CTSWP56202 376 aa30.02■■■□□ 2.4
PTPRA-208ENST00000455631 PTPN12Q05209 780 aaKnown RBP30.02■■■□□ 2.4
PTPRA-208ENST00000455631 ARMC9Q7Z3E5 817 aa30.02■■■□□ 2.4
PTPRA-208ENST00000455631 MYH3P11055 1940 aa30.02■■■□□ 2.4
PTPRA-208ENST00000455631 ELL2O00472 640 aaPredicted RBP30.01■■■□□ 2.39
PTPRA-208ENST00000455631 R3HDMLQ9H3Y0 253 aa30.01■■■□□ 2.39
PTPRA-208ENST00000455631 GCC1Q96CN9 775 aa30■■■□□ 2.39
PTPRA-208ENST00000455631 METTL22Q9BUU2 404 aaPredicted RBP30■■■□□ 2.39
PTPRA-208ENST00000455631 CFHR5Q9BXR6 569 aa30■■■□□ 2.39
PTPRA-208ENST00000455631 MYBBP1AQ9BQG0 1328 aaKnown RBP29.99■■■□□ 2.39
PTPRA-208ENST00000455631 STRIP1Q5VSL9 837 aa29.99■■■□□ 2.39
PTPRA-208ENST00000455631 MINPP1Q9UNW1 487 aa29.99■■■□□ 2.39
PTPRA-208ENST00000455631 DDX58O95786 925 aaKnown RBP29.98■■■□□ 2.39
PTPRA-208ENST00000455631 CCT4P50991 539 aaKnown RBP29.98■■■□□ 2.39
PTPRA-208ENST00000455631 APOBEC3FQ8IUX4 373 aaKnown RBP29.98■■■□□ 2.39
PTPRA-208ENST00000455631 COA1Q9GZY4 146 aa29.98■■■□□ 2.39
PTPRA-208ENST00000455631 BSDC1Q9NW68 430 aaPredicted RBP29.98■■■□□ 2.39
PTPRA-208ENST00000455631 GREM2Q9H772 168 aa29.97■■■□□ 2.39
PTPRA-208ENST00000455631 ANGEL1Q9UNK9 670 aaKnown RBP29.97■■■□□ 2.39
PTPRA-208ENST00000455631 SPRYD7Q5W111 196 aa29.96■■■□□ 2.39
PTPRA-208ENST00000455631 ADAMTS8Q9UP79 889 aa29.96■■■□□ 2.39
PTPRA-208ENST00000455631 ALDH1A1P00352 501 aa29.95■■■□□ 2.39
PTPRA-208ENST00000455631 ZNF853P0CG23 659 aa29.95■■■□□ 2.39
PTPRA-208ENST00000455631 KIAA0825Q8IV33 1275 aa29.95■■■□□ 2.39
PTPRA-208ENST00000455631 TTLL11Q8NHH1 800 aa29.95■■■□□ 2.39
PTPRA-208ENST00000455631 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.95■■■□□ 2.39
PTPRA-208ENST00000455631 MAP3K2Q9Y2U5 619 aa29.95■■■□□ 2.39
PTPRA-208ENST00000455631 TXNRD3Q86VQ6 643 aa29.94■■■□□ 2.38
PTPRA-208ENST00000455631 FZD1Q9UP38 647 aa29.94■■■□□ 2.38
PTPRA-208ENST00000455631 TRIM17Q9Y577 477 aa29.94■■■□□ 2.38
PTPRA-208ENST00000455631 LDLRAD1Q5T700 205 aa29.93■■■□□ 2.38
PTPRA-208ENST00000455631 IFT57Q9NWB7 429 aa29.93■■■□□ 2.38
PTPRA-208ENST00000455631 MMP14P50281 582 aa29.92■■■□□ 2.38
PTPRA-208ENST00000455631 TTLL5Q6EMB2 1281 aa29.92■■■□□ 2.38
PTPRA-208ENST00000455631 COL1A1P02452 1464 aaPredicted RBP29.92■■■□□ 2.38
PTPRA-208ENST00000455631 MANSC4A6NHS7 340 aaPredicted RBP29.91■■■□□ 2.38
PTPRA-208ENST00000455631 GNAI1P63096 354 aa29.91■■■□□ 2.38
PTPRA-208ENST00000455631 LEMD3Q9Y2U8 911 aa29.91■■■□□ 2.38
PTPRA-208ENST00000455631 KLRK1P26718 216 aa29.9■■■□□ 2.38
PTPRA-208ENST00000455631 IFNL1Q8IU54 200 aa29.9■■■□□ 2.38
PTPRA-208ENST00000455631 C8orf58Q8NAV2 365 aa29.9■■■□□ 2.38
PTPRA-208ENST00000455631 POTEFA5A3E0 1075 aa29.89■■■□□ 2.38
PTPRA-208ENST00000455631 IGKV5-2P06315 115 aa29.89■■■□□ 2.38
PTPRA-208ENST00000455631 IGHMBP2P38935 993 aaKnown RBP29.89■■■□□ 2.38
PTPRA-208ENST00000455631 CCDC30Q5VVM6 783 aa29.89■■■□□ 2.38
PTPRA-208ENST00000455631 OTOP1Q7RTM1 612 aa29.89■■■□□ 2.38
PTPRA-208ENST00000455631 SLC10A4Q96EP9 437 aa29.89■■■□□ 2.38
PTPRA-208ENST00000455631 GTF2IP78347 998 aa29.88■■■□□ 2.37
PTPRA-208ENST00000455631 CALD1Q05682 793 aaKnown RBP29.88■■■□□ 2.37
PTPRA-208ENST00000455631 HABP4Q5JVS0 413 aaKnown RBP29.88■■■□□ 2.37
PTPRA-208ENST00000455631 ZBED3Q96IU2 234 aaPredicted RBP29.88■■■□□ 2.37
PTPRA-208ENST00000455631 ZNF804BA4D1E1 1349 aa29.88■■■□□ 2.37
PTPRA-208ENST00000455631 LAMB1P07942 1786 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 INHBEP58166 350 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 NEXNQ0ZGT2 675 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 INTS3Q68E01 1043 aaKnown RBP29.87■■■□□ 2.37
PTPRA-208ENST00000455631 KSR2Q6VAB6 950 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 DEFB129Q9H1M3 183 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 RBBP6Q7Z6E9 1792 aaKnown RBP29.87■■■□□ 2.37
PTPRA-208ENST00000455631 ECM29Q5VYK3 1845 aa29.87■■■□□ 2.37
PTPRA-208ENST00000455631 PI4KAP2A4QPH2 592 aa29.86■■■□□ 2.37
PTPRA-208ENST00000455631 CWF19L2Q2TBE0 894 aaKnown RBP29.86■■■□□ 2.37
PTPRA-208ENST00000455631 PI4KAP1Q8N8J0 262 aa29.86■■■□□ 2.37
PTPRA-208ENST00000455631 WNK4Q96J92 1243 aa29.86■■■□□ 2.37
PTPRA-208ENST00000455631 HTTP42858 3142 aa29.86■■■□□ 2.37
PTPRA-208ENST00000455631 SSC5DA1L4H1 1573 aa29.86■■■□□ 2.37
PTPRA-208ENST00000455631 IGF2BP3O00425 579 aaKnown RBP eCLIP29.85■■■□□ 2.37
PTPRA-208ENST00000455631 ZBTB48P10074 688 aaPredicted RBP29.85■■■□□ 2.37
PTPRA-208ENST00000455631 DLGAP5Q15398 846 aa29.85■■■□□ 2.37
PTPRA-208ENST00000455631 CLMNQ96JQ2 1002 aa29.85■■■□□ 2.37
PTPRA-208ENST00000455631 MKI67P46013 3256 aaKnown RBP29.84■■■□□ 2.37
PTPRA-208ENST00000455631 KCNJ4P48050 445 aa29.84■■■□□ 2.37
PTPRA-208ENST00000455631 UBE3BQ7Z3V4 1068 aa29.84■■■□□ 2.37
PTPRA-208ENST00000455631 CHMP4AQ9BY43 222 aa29.84■■■□□ 2.37
PTPRA-208ENST00000455631 ANKRD2Q9GZV1 360 aa29.84■■■□□ 2.37
PTPRA-208ENST00000455631 APAF1O14727 1248 aa29.83■■■□□ 2.37
PTPRA-208ENST00000455631 PPP1R12BO60237 982 aaPredicted RBP29.83■■■□□ 2.37
PTPRA-208ENST00000455631 MAP3K11Q16584 847 aa29.83■■■□□ 2.37
PTPRA-208ENST00000455631 ERO1AQ96HE7 468 aa29.83■■■□□ 2.37
PTPRA-208ENST00000455631 MPHOSPH8Q99549 860 aa29.83■■■□□ 2.37
PTPRA-208ENST00000455631 NEURL1BA8MQ27 555 aa29.82■■■□□ 2.36
PTPRA-208ENST00000455631 ITGA6P23229 1130 aa29.82■■■□□ 2.36
PTPRA-208ENST00000455631 CD99L2Q8TCZ2 262 aa29.81■■■□□ 2.36
PTPRA-208ENST00000455631 PTPN22Q9Y2R2 807 aa29.81■■■□□ 2.36
PTPRA-208ENST00000455631 PPP2R3BQ9Y5P8 575 aa29.81■■■□□ 2.36
PTPRA-208ENST00000455631 TSPYL6Q8N831 410 aa29.8■■■□□ 2.36
PTPRA-208ENST00000455631 CD209Q9NNX6 404 aa29.8■■■□□ 2.36
PTPRA-208ENST00000455631 CLRN2A0PK11 232 aa29.79■■■□□ 2.36
PTPRA-208ENST00000455631 CRHR2Q13324 411 aa29.79■■■□□ 2.36
PTPRA-208ENST00000455631 PCDHAC2Q9Y5I4 1007 aa29.79■■■□□ 2.36
PTPRA-208ENST00000455631 F8W031 263 aaPredicted RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms