RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 MX1P20591 662 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 ADORA1P30542 326 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 KCNJ4P48050 445 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 DPP8Q6V1X1 898 aaPredicted RBP20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 C15orf52Q6ZUT6 534 aaKnown RBP20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 RTFDC1Q9BY42 306 aaPredicted RBP20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 OSBPL3Q9H4L5 887 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 POLLQ9UGP5 575 aa20.35■□□□□ 0.85
CCDC90B-202ENST00000455220 UFL1O94874 794 aa20.34■□□□□ 0.85
CCDC90B-202ENST00000455220 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
CCDC90B-202ENST00000455220 TTC41PQ6P2S7 1318 aa20.34■□□□□ 0.85
CCDC90B-202ENST00000455220 PDE1AP54750 535 aa20.34■□□□□ 0.85
CCDC90B-202ENST00000455220 RTKN2Q8IZC4 609 aa20.34■□□□□ 0.85
CCDC90B-202ENST00000455220 AOX1Q06278 1338 aa20.33■□□□□ 0.85
CCDC90B-202ENST00000455220 MED23Q9ULK4 1368 aa20.33■□□□□ 0.84
CCDC90B-202ENST00000455220 ECHDC1Q9NTX5 307 aa20.33■□□□□ 0.84
CCDC90B-202ENST00000455220 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.84
CCDC90B-202ENST00000455220 BCS1LQ9Y276 419 aa20.33■□□□□ 0.84
CCDC90B-202ENST00000455220 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
CCDC90B-202ENST00000455220 KLRK1P26718 216 aa20.32■□□□□ 0.84
CCDC90B-202ENST00000455220 RGS3P49796 1198 aa20.32■□□□□ 0.84
CCDC90B-202ENST00000455220 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
CCDC90B-202ENST00000455220 PSMD1Q99460 953 aa20.32■□□□□ 0.84
CCDC90B-202ENST00000455220 PI4K2BQ8TCG2 481 aa20.31■□□□□ 0.84
CCDC90B-202ENST00000455220 C6orf229H3BNL8 230 aa20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 ZBTB22O15209 634 aa20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 FBXO33Q7Z6M2 555 aa20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 TXNRD3Q86VQ6 643 aa20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
CCDC90B-202ENST00000455220 ATP5JP18859 108 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 PHKA1P46020 1223 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 EYA3Q99504 573 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 ARID4AP29374 1257 aaPredicted RBP20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 GYG1P46976 350 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 BCAMP50895 628 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 FKBP4Q02790 459 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC90B-202ENST00000455220 ERC2O15083 957 aa20.28■□□□□ 0.84
CCDC90B-202ENST00000455220 GLRX3O76003 335 aaKnown RBP20.28■□□□□ 0.84
CCDC90B-202ENST00000455220 UQCRFS1P1P0C7P4 283 aa20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 HIBADHP31937 336 aaKnown RBP20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 WASHC4Q2M389 1173 aa20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 TTC39AQ5SRH9 613 aa20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
CCDC90B-202ENST00000455220 NFKBIEO00221 500 aa20.26■□□□□ 0.83
CCDC90B-202ENST00000455220 TTC22Q5TAA0 569 aa20.26■□□□□ 0.83
CCDC90B-202ENST00000455220 ZNF804AQ7Z570 1209 aa20.26■□□□□ 0.83
CCDC90B-202ENST00000455220 ZC3H12CQ9C0D7 883 aaKnown RBP20.26■□□□□ 0.83
CCDC90B-202ENST00000455220 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
CCDC90B-202ENST00000455220 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
CCDC90B-202ENST00000455220 TAOK3Q9H2K8 898 aa20.25■□□□□ 0.83
CCDC90B-202ENST00000455220 VPS37DQ86XT2 251 aa20.25■□□□□ 0.83
CCDC90B-202ENST00000455220 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
CCDC90B-202ENST00000455220 SEMA3EO15041 775 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 IL1R1P14778 569 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 GSPT1P15170 499 aaKnown RBP20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 MCAMP43121 646 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 RASGRF1Q13972 1273 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 SCARF1Q14162 830 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 TDRD7Q8NHU6 1098 aaKnown RBP20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 HAUS7Q99871 368 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 COA1Q9GZY4 146 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 BOLA2Q9H3K6 86 aa20.24■□□□□ 0.83
CCDC90B-202ENST00000455220 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 COL1A1P02452 1464 aaPredicted RBP20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 YBX3P16989 372 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 PDS5AQ29RF7 1337 aaKnown RBP20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 BMP2KLQ5H9B9 411 aa20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 UTRNP46939 3433 aa20.23■□□□□ 0.83
CCDC90B-202ENST00000455220 MYH13Q9UKX3 1938 aa20.22■□□□□ 0.83
CCDC90B-202ENST00000455220 AOC3Q16853 763 aa20.22■□□□□ 0.83
CCDC90B-202ENST00000455220 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
CCDC90B-202ENST00000455220 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
CCDC90B-202ENST00000455220 PPIP5K2O43314 1243 aa20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 DENND2AQ9ULE3 1009 aa20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 CHD4Q14839 1912 aa20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 COL4A5P29400 1685 aa20.21■□□□□ 0.83
CCDC90B-202ENST00000455220 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
CCDC90B-202ENST00000455220 PODNQ7Z5L7 613 aa20.2■□□□□ 0.82
CCDC90B-202ENST00000455220 IQSEC3Q9UPP2 1182 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-202ENST00000455220 ZAP70P43403 619 aa20.19■□□□□ 0.82
CCDC90B-202ENST00000455220 RASSF7Q02833 373 aa20.19■□□□□ 0.82
CCDC90B-202ENST00000455220 DOK7Q18PE1 504 aa20.19■□□□□ 0.82
CCDC90B-202ENST00000455220 DNAJC2Q99543 621 aaKnown RBP20.19■□□□□ 0.82
CCDC90B-202ENST00000455220 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
CCDC90B-202ENST00000455220 ECE2O60344 883 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms