RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 ADM5C9JUS6 153 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 NEXNQ0ZGT2 675 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
NIF3L1-209ENST00000454952 PAPPA2Q9BXP8 1791 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 APAF1O14727 1248 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 EGFRP00533 1210 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 SLC10A3P09131 477 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 KIF23Q02241 960 aaPredicted RBP10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 SCARF1Q14162 830 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 OGFOD1Q8N543 542 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 CDCA5Q96FF9 252 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 PHAXQ9H814 394 aaKnown RBP10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 SEC31BQ9NQW1 1179 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 CACNA1FO60840 1977 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 MYO3BQ8WXR4 1341 aa10.31□□□□□ -0.76
NIF3L1-209ENST00000454952 MED23Q9ULK4 1368 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 CTSWP56202 376 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 KSR2Q6VAB6 950 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 MYOZ2Q9NPC6 264 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 BSDC1Q9NW68 430 aaPredicted RBP10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 COL4A1P02462 1669 aa10.3□□□□□ -0.76
NIF3L1-209ENST00000454952 NF2P35240 595 aa10.29□□□□□ -0.76
NIF3L1-209ENST00000454952 ZIC5Q96T25 663 aa10.29□□□□□ -0.76
NIF3L1-209ENST00000454952 GMLQ99445 158 aa10.29□□□□□ -0.76
NIF3L1-209ENST00000454952 RNF186Q9NXI6 227 aa10.29□□□□□ -0.76
NIF3L1-209ENST00000454952 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 PDE4DIPQ5VU43 2346 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 TRPA1O75762 1119 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 SLC34A2O95436 690 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 IGHMBP2P38935 993 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 STRIP1Q5VSL9 837 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 C8orf58Q8NAV2 365 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 ANKRD2Q9GZV1 360 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 COA1Q9GZY4 146 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 LEMD3Q9Y2U8 911 aa10.28□□□□□ -0.76
NIF3L1-209ENST00000454952 PI4KAP2A4QPH2 592 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 CCT4P50991 539 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 DLK2Q6UY11 383 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 CTU1Q7Z7A3 348 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 RASAL3Q86YV0 1011 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 PI4KAP1Q8N8J0 262 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 TTLL11Q8NHH1 800 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 ASTN2O75129 1339 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-209ENST00000454952 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 TTLL12Q14166 644 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 CCDC27Q2M243 656 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 NOM1Q5C9Z4 860 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 ARMC9Q7Z3E5 817 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 APOBEC3FQ8IUX4 373 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 MPHOSPH8Q99549 860 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 GREM2Q9H772 168 aa10.26□□□□□ -0.77
NIF3L1-209ENST00000454952 COL1A1P02452 1464 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 IGKV5-2P06315 115 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 KCNJ4P48050 445 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 SREBF2Q12772 1141 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 UBE3BQ7Z3V4 1068 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 JARID2Q92833 1246 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 FBXW7Q969H0 707 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 ZNF804BA4D1E1 1349 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 IL16Q14005 1332 aa10.25□□□□□ -0.77
NIF3L1-209ENST00000454952 H7C1W4 665 aa10.24□□□□□ -0.77
NIF3L1-209ENST00000454952 TWISTNBQ3B726 338 aaPredicted RBP10.24□□□□□ -0.77
NIF3L1-209ENST00000454952 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
NIF3L1-209ENST00000454952 TSPYL6Q8N831 410 aa10.24□□□□□ -0.77
NIF3L1-209ENST00000454952 ZNF646O15015 1829 aaPredicted RBP10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 UBE2Q2LH0YL09 131 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 WNT10BO00744 389 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 ITGA6P23229 1130 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 TM4SF4P48230 202 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 GCKRQ14397 625 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 CWF19L2Q2TBE0 894 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 NBPF9Q3BBW0 867 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 LINS1Q8NG48 757 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
NIF3L1-209ENST00000454952 ANKRD18BA2A2Z9 1011 aa10.22□□□□□ -0.77
NIF3L1-209ENST00000454952 UNCXA6NJT0 531 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms