RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 POLLQ9UGP5 575 aa13.81□□□□□ -0.2
TRAF4-206ENST00000454852 C21orf2O43822 256 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 MX1P20591 662 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 DPP8Q6V1X1 898 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-206ENST00000454852 FBXO33Q7Z6M2 555 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 C16orf71Q8IYS4 520 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-206ENST00000454852 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 DBNDD2Q9BQY9 259 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 CCDC8Q9H0W5 538 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-206ENST00000454852 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
TRAF4-206ENST00000454852 UFL1O94874 794 aa13.79□□□□□ -0.2
TRAF4-206ENST00000454852 KCNJ4P48050 445 aa13.79□□□□□ -0.2
TRAF4-206ENST00000454852 PDE1AP54750 535 aa13.79□□□□□ -0.2
TRAF4-206ENST00000454852 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
TRAF4-206ENST00000454852 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-206ENST00000454852 EYA3Q99504 573 aa13.79□□□□□ -0.2
TRAF4-206ENST00000454852 TLR7Q9NYK1 1049 aaKnown RBP13.79□□□□□ -0.2
TRAF4-206ENST00000454852 WTIPA6NIX2 430 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-206ENST00000454852 SNAP23O00161 211 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 ATP5JP18859 108 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 ARID4AP29374 1257 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-206ENST00000454852 ADORA1P30542 326 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRAF4-206ENST00000454852 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 FAM84BQ96KN1 310 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-206ENST00000454852 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
TRAF4-206ENST00000454852 PDS5AQ29RF7 1337 aaKnown RBP13.78□□□□□ -0.2
TRAF4-206ENST00000454852 SEMA3EO15041 775 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 ERC2O15083 957 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
TRAF4-206ENST00000454852 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 CAVIN4Q5BKX8 364 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
TRAF4-206ENST00000454852 IL1R1P14778 569 aa13.76□□□□□ -0.21
TRAF4-206ENST00000454852 KLRK1P26718 216 aa13.76□□□□□ -0.21
TRAF4-206ENST00000454852 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
TRAF4-206ENST00000454852 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
TRAF4-206ENST00000454852 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
TRAF4-206ENST00000454852 AKAP11Q9UKA4 1901 aa13.76□□□□□ -0.21
TRAF4-206ENST00000454852 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 NFKBIEO00221 500 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 IGSF3O75054 1194 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 PHKA1P46020 1223 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 BCAMP50895 628 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 ZNF804AQ7Z570 1209 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 TICAM2Q86XR7 235 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 TDRD7Q8NHU6 1098 aaKnown RBP13.75□□□□□ -0.21
TRAF4-206ENST00000454852 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
TRAF4-206ENST00000454852 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
TRAF4-206ENST00000454852 GNL3LQ9NVN8 582 aaKnown RBP13.75□□□□□ -0.21
TRAF4-206ENST00000454852 GYG1P46976 350 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 PODNQ7Z5L7 613 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 HAUS7Q99871 368 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
TRAF4-206ENST00000454852 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-206ENST00000454852 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
TRAF4-206ENST00000454852 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
TRAF4-206ENST00000454852 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
TRAF4-206ENST00000454852 FAM205AQ6ZU69 1335 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 PSME4Q14997 1843 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■□□□ 13.8
TRAF4-206ENST00000454852 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
TRAF4-206ENST00000454852 MCAMP43121 646 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 RGS3P49796 1198 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 VPS37DQ86XT2 251 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 GPR101Q96P66 508 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-206ENST00000454852 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-206ENST00000454852 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
TRAF4-206ENST00000454852 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-206ENST00000454852 SALL1Q9NSC2 1324 aa13.71□□□□□ -0.21
TRAF4-206ENST00000454852 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
TRAF4-206ENST00000454852 SCARF1Q14162 830 aa13.71□□□□□ -0.21
TRAF4-206ENST00000454852 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
TRAF4-206ENST00000454852 SPATA5Q8NB90 893 aa13.71□□□□□ -0.21
TRAF4-206ENST00000454852 COL4A5P29400 1685 aa13.71□□□□□ -0.21
TRAF4-206ENST00000454852 RFX7Q2KHR2 1363 aa13.71□□□□□ -0.22
TRAF4-206ENST00000454852 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
TRAF4-206ENST00000454852 DOCK2Q92608 1830 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 GRIN3BO60391 1043 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
TRAF4-206ENST00000454852 AOC3Q16853 763 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 TMED8Q6PL24 325 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-206ENST00000454852 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 SBF1O95248 1867 aa13.7□□□□□ -0.22
TRAF4-206ENST00000454852 CHD4Q14839 1912 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
TRAF4-206ENST00000454852 PRELPP51888 382 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms