RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 TM4SF4P48230 202 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
CLCN4-204ENST00000454850 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
CLCN4-204ENST00000454850 ATP2B4P23634 1241 aa12.83□□□□□ -0.36
CLCN4-204ENST00000454850 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.36
CLCN4-204ENST00000454850 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
CLCN4-204ENST00000454850 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
CLCN4-204ENST00000454850 LAMB1P07942 1786 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 WNT10BO00744 389 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-204ENST00000454850 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
CLCN4-204ENST00000454850 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
CLCN4-204ENST00000454850 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
CLCN4-204ENST00000454850 NOM1Q5C9Z4 860 aaKnown RBP12.81□□□□□ -0.36
CLCN4-204ENST00000454850 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
CLCN4-204ENST00000454850 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
CLCN4-204ENST00000454850 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
CLCN4-204ENST00000454850 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
CLCN4-204ENST00000454850 TRIOBPQ9H2D6 2365 aa12.8□□□□□ -0.36
CLCN4-204ENST00000454850 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
CLCN4-204ENST00000454850 CTSWP56202 376 aa12.8□□□□□ -0.36
CLCN4-204ENST00000454850 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLCN4-204ENST00000454850 HABP4Q5JVS0 413 aaKnown RBP12.8□□□□□ -0.36
CLCN4-204ENST00000454850 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
CLCN4-204ENST00000454850 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
CLCN4-204ENST00000454850 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
CLCN4-204ENST00000454850 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
CLCN4-204ENST00000454850 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
CLCN4-204ENST00000454850 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
CLCN4-204ENST00000454850 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 RALBP1Q15311 655 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 OTOP1Q7RTM1 612 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 TXNRD3Q86VQ6 643 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 METTL22Q9BUU2 404 aaPredicted RBP12.78□□□□□ -0.36
CLCN4-204ENST00000454850 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 GREM2Q9H772 168 aa12.78□□□□□ -0.36
CLCN4-204ENST00000454850 KLRK1P26718 216 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 TTLL5Q6EMB2 1281 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 SLC10A4Q96EP9 437 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 COA1Q9GZY4 146 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.37
CLCN4-204ENST00000454850 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 SSC5DA1L4H1 1573 aa12.77□□□□□ -0.37
CLCN4-204ENST00000454850 MANSC4A6NHS7 340 aaPredicted RBP12.76□□□□□ -0.37
CLCN4-204ENST00000454850 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLCN4-204ENST00000454850 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
CLCN4-204ENST00000454850 GTF2IP78347 998 aa12.76□□□□□ -0.37
CLCN4-204ENST00000454850 CD99L2Q8TCZ2 262 aa12.76□□□□□ -0.37
CLCN4-204ENST00000454850 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
CLCN4-204ENST00000454850 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
CLCN4-204ENST00000454850 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
CLCN4-204ENST00000454850 WNK4Q96J92 1243 aa12.75□□□□□ -0.37
CLCN4-204ENST00000454850 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
CLCN4-204ENST00000454850 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
CLCN4-204ENST00000454850 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
CLCN4-204ENST00000454850 SZT2Q5T011 3432 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 ZBTB48P10074 688 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-204ENST00000454850 EN2P19622 333 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-204ENST00000454850 KCNJ4P48050 445 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
CLCN4-204ENST00000454850 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 ERO1AQ96HE7 468 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
CLCN4-204ENST00000454850 LEMD3Q9Y2U8 911 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
CLCN4-204ENST00000454850 CLRN2A0PK11 232 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 F8W031 263 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-204ENST00000454850 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-204ENST00000454850 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 INHBEP58166 350 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 GNAI1P63096 354 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 CRHR2Q13324 411 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 PTPN22Q9Y2R2 807 aa12.73□□□□□ -0.37
CLCN4-204ENST00000454850 MMP14P50281 582 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
CLCN4-204ENST00000454850 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms