RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ATP5JP18859 108 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 GJB2P29033 226 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 KCNJ4P48050 445 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 BLOC1S2Q6QNY1 142 aa12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-206ENST00000454704 TM4SF1P30408 202 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 KAZALD1Q96I82 304 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 FSD1Q9BTV5 496 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 NSFL1CQ9UNZ2 370 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 LAMA4Q16363 1823 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 DLEC1Q9Y238 1755 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 NRXN2Q9P2S2 1712 aa12.55□□□□□ -0.4
GTF3C2-206ENST00000454704 SLC27A2O14975 620 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 ANXA1P04083 346 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 KRT85P78386 507 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 HTRA3P83110 453 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 PTH1RQ03431 593 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 RASSF7Q02833 373 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 NFIXQ14938 502 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
GTF3C2-206ENST00000454704 MTERF4Q7Z6M4 381 aaKnown RBP12.53□□□□□ -0.4
GTF3C2-206ENST00000454704 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
GTF3C2-206ENST00000454704 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
GTF3C2-206ENST00000454704 CNPY2Q9Y2B0 182 aa12.53□□□□□ -0.4
GTF3C2-206ENST00000454704 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
GTF3C2-206ENST00000454704 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 CAVIN2O95810 425 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 FSTL1Q12841 308 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 PCNTO95613 3336 aa12.52□□□□□ -0.41
GTF3C2-206ENST00000454704 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 ME3Q16798 604 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 ADCK5Q3MIX3 580 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 TNNI3KQ59H18 835 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 MYD88Q99836 296 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 FPGT-TNNI3KV9GXZ4 949 aa12.51□□□□□ -0.41
GTF3C2-206ENST00000454704 MYH7P12883 1935 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 LARGE1O95461 756 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 SERPINB2P05120 415 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 ATL3Q6DD88 541 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 HAUS7Q99871 368 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 CCDC8Q9H0W5 538 aaPredicted RBP12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
GTF3C2-206ENST00000454704 ABCC12Q96J65 1359 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 FIBPO43427 364 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 TAF5LO75529 589 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 PRELPP51888 382 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms