RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TTC41PQ6P2S7 1318 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 ZNF213O14771 459 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 TAF5LO75529 589 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
DDR1-240ENST00000454612 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 CMTR1Q8N1G2 835 aaKnown RBP13.06□□□□□ -0.32
DDR1-240ENST00000454612 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 LETM1O95202 739 aaPredicted RBP13.06□□□□□ -0.32
DDR1-240ENST00000454612 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
DDR1-240ENST00000454612 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 KRT32Q14532 448 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 NR1I2O75469 434 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 ADORA1P30542 326 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 SALL3Q9BXA9 1300 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 SERPINC1P01008 464 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 CYP2E1P05181 493 aaPredicted RBP13.05□□□□□ -0.32
DDR1-240ENST00000454612 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
DDR1-240ENST00000454612 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
DDR1-240ENST00000454612 TPM4P67936 248 aa13.04□□□□□ -0.32
DDR1-240ENST00000454612 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
DDR1-240ENST00000454612 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
DDR1-240ENST00000454612 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
DDR1-240ENST00000454612 PHKG2P15735 406 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
DDR1-240ENST00000454612 ERICH2A1L162 156 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 CYP21A2P08686 494 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
DDR1-240ENST00000454612 CPLX3Q8WVH0 158 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 PHKBQ93100 1093 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
DDR1-240ENST00000454612 ZAP70P43403 619 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
DDR1-240ENST00000454612 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
DDR1-240ENST00000454612 HMGN5P82970 282 aaKnown RBP13.02□□□□□ -0.32
DDR1-240ENST00000454612 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.32
DDR1-240ENST00000454612 PRC1O43663 620 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 TNNT1P13805 278 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
DDR1-240ENST00000454612 CYP27B1O15528 508 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 STARD3NLO95772 234 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 CUL4AQ13619 759 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 CERKQ8TCT0 537 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.33
DDR1-240ENST00000454612 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
DDR1-240ENST00000454612 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 NAPBQ9H115 298 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDR1-240ENST00000454612 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
DDR1-240ENST00000454612 SMIM5Q71RC9 77 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 B4E1Z4 1266 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
DDR1-240ENST00000454612 PRDM1O75626 825 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 POLA2Q14181 598 aa13.01□□□□□ -0.33
DDR1-240ENST00000454612 DYNC1I1O14576 645 aa13□□□□□ -0.33
DDR1-240ENST00000454612 TMC6Q7Z403 805 aa13□□□□□ -0.33
DDR1-240ENST00000454612 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■■■□ 25.7
DDR1-240ENST00000454612 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
DDR1-240ENST00000454612 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
DDR1-240ENST00000454612 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
DDR1-240ENST00000454612 DHX32Q7L7V1 743 aaKnown RBP13□□□□□ -0.33
DDR1-240ENST00000454612 FAM200AQ8TCP9 573 aa13□□□□□ -0.33
DDR1-240ENST00000454612 XAGE2Q96GT9 111 aa13□□□□□ -0.33
DDR1-240ENST00000454612 CBX8Q9HC52 389 aa13□□□□□ -0.33
DDR1-240ENST00000454612 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
DDR1-240ENST00000454612 ADCY9O60503 1353 aa13□□□□□ -0.33
DDR1-240ENST00000454612 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
DDR1-240ENST00000454612 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
DDR1-240ENST00000454612 AIFM3Q96NN9 605 aa13□□□□□ -0.33
DDR1-240ENST00000454612 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
DDR1-240ENST00000454612 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
DDR1-240ENST00000454612 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
DDR1-240ENST00000454612 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
DDR1-240ENST00000454612 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
DDR1-240ENST00000454612 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
DDR1-240ENST00000454612 ANKRD18BA2A2Z9 1011 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 EYA2O00167 538 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 SCRN1Q12765 414 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
DDR1-240ENST00000454612 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms