RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.12
LINC00343-203ENST00000454555 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
LINC00343-203ENST00000454555 CSF1RP07333 972 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 HCLS1P14317 486 aaPredicted RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 UBE2HP62256 183 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 RABL6Q3YEC7 729 aaPredicted RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 EPHA10Q5JZY3 1008 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 SASS6Q6UVJ0 657 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 TTC14Q96N46 770 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 NSFL1CQ9UNZ2 370 aaKnown RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 GLRX3O76003 335 aaKnown RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 CCDC24Q8N4L8 307 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 TM6SF1Q9BZW5 370 aa15.82■□□□□ 0.12
LINC00343-203ENST00000454555 SH2B1Q9NRF2 756 aaPredicted RBP15.82■□□□□ 0.12
LINC00343-203ENST00000454555 ZSCAN22P10073 491 aaPredicted RBP15.81■□□□□ 0.12
LINC00343-203ENST00000454555 MTX1Q13505 466 aa15.81■□□□□ 0.12
LINC00343-203ENST00000454555 TTLL11Q8NHH1 800 aa15.81■□□□□ 0.12
LINC00343-203ENST00000454555 BICC1Q9H694 974 aaKnown RBP15.81■□□□□ 0.12
LINC00343-203ENST00000454555 SURF6O75683 361 aaKnown RBP15.8■□□□□ 0.12
LINC00343-203ENST00000454555 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
LINC00343-203ENST00000454555 CTSWP56202 376 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 LSG1Q9H089 658 aaKnown RBP15.8■□□□□ 0.12
LINC00343-203ENST00000454555 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
LINC00343-203ENST00000454555 C10orf71Q711Q0 1435 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 TPM3P06753 285 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 PDE6BP35913 854 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 LMBR1LQ6UX01 489 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 ERC1Q8IUD2 1116 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
LINC00343-203ENST00000454555 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
LINC00343-203ENST00000454555 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
LINC00343-203ENST00000454555 LAMB2P55268 1798 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 HIP1O00291 1037 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 STX6O43752 255 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 VPS53Q5VIR6 699 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 KCNB2Q92953 911 aa15.79■□□□□ 0.12
LINC00343-203ENST00000454555 HMGN5P82970 282 aaKnown RBP15.78■□□□□ 0.12
LINC00343-203ENST00000454555 CCDC152Q4G0S7 254 aa15.78■□□□□ 0.12
LINC00343-203ENST00000454555 PRIMPOLQ96LW4 560 aa15.78■□□□□ 0.12
LINC00343-203ENST00000454555 SMC3Q9UQE7 1217 aa15.78■□□□□ 0.12
LINC00343-203ENST00000454555 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
LINC00343-203ENST00000454555 SRGAP3O43295 1099 aa15.77■□□□□ 0.12
LINC00343-203ENST00000454555 F13A1P00488 732 aa15.77■□□□□ 0.12
LINC00343-203ENST00000454555 FOXD4L5Q5VV16 416 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-203ENST00000454555 FOXD4L4Q8WXT5 416 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-203ENST00000454555 UQCRHLA0A096LP55 91 aa15.77■□□□□ 0.11
LINC00343-203ENST00000454555 UQCRHP07919 91 aa15.77■□□□□ 0.11
LINC00343-203ENST00000454555 RNF39Q9H2S5 420 aa15.77■□□□□ 0.11
LINC00343-203ENST00000454555 IL1RAPL2Q9NP60 686 aa15.77■□□□□ 0.11
LINC00343-203ENST00000454555 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.11
LINC00343-203ENST00000454555 SRGNP10124 158 aa15.76■□□□□ 0.11
LINC00343-203ENST00000454555 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
LINC00343-203ENST00000454555 AK2P54819 239 aa15.76■□□□□ 0.11
LINC00343-203ENST00000454555 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
LINC00343-203ENST00000454555 DIAPH3Q9NSV4 1193 aa15.76■□□□□ 0.11
LINC00343-203ENST00000454555 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
LINC00343-203ENST00000454555 TGFB2P61812 414 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 RNF214Q8ND24 703 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 PIBF1Q8WXW3 757 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 GREM2Q9H772 168 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 TCHHQ07283 1943 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 H0YIN7 160 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 SYT1P21579 422 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
LINC00343-203ENST00000454555 IFIT5Q13325 482 aaKnown RBP15.75■□□□□ 0.11
LINC00343-203ENST00000454555 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 C2CD5Q86YS7 1000 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 CCDC85AQ96PX6 553 aaPredicted RBP15.75■□□□□ 0.11
LINC00343-203ENST00000454555 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
LINC00343-203ENST00000454555 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 GADD45BO75293 160 aaPredicted RBP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 NPR1P16066 1061 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 ITGA6P23229 1130 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 NOL8Q76FK4 1167 aaKnown RBP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 DDX46Q7L014 1031 aaKnown RBP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 CRAMP1Q96RY5 1269 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 ZSWIM6Q9HCJ5 1215 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC00343-203ENST00000454555 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
LINC00343-203ENST00000454555 MYH3P11055 1940 aa15.73■□□□□ 0.11
LINC00343-203ENST00000454555 ZKSCAN1P17029 563 aaPredicted RBP15.73■□□□□ 0.11
LINC00343-203ENST00000454555 PDCP20941 246 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms