RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 XDHP47989 1333 aa7.76□□□□□ -1.17
HLA-DPA3-207ENST00000454398 SNAP23O00161 211 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TBC1D8O95759 1140 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PCCAP05165 728 aaPredicted RBP7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 IGKV5-2P06315 115 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 USP17L8P0C7I0 530 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 G2E3Q7L622 706 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 UBE3BQ7Z3V4 1068 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ANKRD18AQ8IVF6 992 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 IFT57Q9NWB7 429 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 SAGE1Q9NXZ1 904 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PODXL2Q9NZ53 605 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CEP290O15078 2479 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 IRS2Q9Y4H2 1338 aa7.75□□□□□ -1.17
HLA-DPA3-207ENST00000454398 MED23Q9ULK4 1368 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 KIAA0100Q14667 2235 aaKnown RBP7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PI4KAP2A4QPH2 592 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 USP17L3A6NCW0 530 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 USP17L4A6NCW7 530 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PDE8AO60658 829 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 DACT2Q5SW24 774 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 USP17L1Q7RTZ2 530 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CTU1Q7Z7A3 348 aaKnown RBP7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 KIAA0825Q8IV33 1275 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PI4KAP1Q8N8J0 262 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CCDC102AQ96A19 550 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 METTL22Q9BUU2 404 aaPredicted RBP7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 HPS5Q9UPZ3 1129 aa7.74□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZSWIM8A7E2V4 1837 aa7.73□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CCDC191Q8NCU4 936 aa7.73□□□□□ -1.17
HLA-DPA3-207ENST00000454398 AGBL3Q8NEM8 1001 aa7.73□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ECM29Q5VYK3 1845 aa7.73□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ARAP2Q8WZ64 1704 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CLRN2A0PK11 232 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 NEURL1BA8MQ27 555 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 F8W031 263 aaPredicted RBP7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 WNT10BO00744 389 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CCT4P50991 539 aaKnown RBP7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CASP7P55210 303 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CERS5Q8N5B7 392 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 TTLL11Q8NHH1 800 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ZBED3Q96IU2 234 aaPredicted RBP7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CLMNQ96JQ2 1002 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 CDC5LQ99459 802 aaKnown RBP7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PRKRIP1Q9H875 184 aaPredicted RBP7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 HDAC9Q9UKV0 1011 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 MINPP1Q9UNW1 487 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 PITPNM2Q9BZ72 1349 aa7.72□□□□□ -1.17
HLA-DPA3-207ENST00000454398 ITGA6P23229 1130 aa7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ATP2B4P23634 1241 aa7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GNAI1P63096 354 aa7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GTF2IP78347 998 aa7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PTPN12Q05209 780 aaKnown RBP7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 HELBQ8NG08 1087 aaPredicted RBP7.71□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TRIOBPQ9H2D6 2365 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 LAMB1P07942 1786 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TAF5LO75529 589 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 DDX58O95786 925 aaKnown RBP7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GJA5P36382 358 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 KCNJ4P48050 445 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CCDC30Q5VVM6 783 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 KSR2Q6VAB6 950 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 BSDC1Q9NW68 430 aaPredicted RBP7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ZNF804BA4D1E1 1349 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SZT2Q5T011 3432 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 F6X3S4 739 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GPR25O00155 361 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 IGF2BP3O00425 579 aaKnown RBP eCLIP7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 IGHMBP2P38935 993 aaKnown RBP7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FKBP1BP68106 108 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CHRNDQ07001 517 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TWISTNBQ3B726 338 aaPredicted RBP7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 EPHA10Q5JZY3 1008 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PODNQ7Z5L7 613 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 OGFOD1Q8N543 542 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 STK31Q9BXU1 1019 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 VEZTQ9HBM0 779 aa7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 RANBP2P49792 3224 aaKnown RBP7.69□□□□□ -1.18
HLA-DPA3-207ENST00000454398 POTEFA5A3E0 1075 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 H7C1W4 665 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 ECM2O94769 699 aaPredicted RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 NF2P35240 595 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 CALD1Q05682 793 aaKnown RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 NEXNQ0ZGT2 675 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FLIIQ13045 1269 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 FKBP5Q13451 457 aaPredicted RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 GCKRQ14397 625 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 STRIP1Q5VSL9 837 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 PRPF38BQ5VTL8 546 aaKnown RBP7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 SPRYD7Q5W111 196 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
HLA-DPA3-207ENST00000454398 APOBEC3FQ8IUX4 373 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms