RNA–Protein interactions for RNA: ENST00000454299.2

RAB28P2-201, Transcript of RAB28, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB28P2, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P2-201ENST00000454299 CNTN3Q9P232 1028 aa9.89□□□□□ -0.83
RAB28P2-201ENST00000454299 LINC01387J3KSC0 135 aa9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 DLL1O00548 723 aa9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 SMNDC1O75940 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 NOS3P29474 1203 aa9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 EEA1Q15075 1411 aa9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
RAB28P2-201ENST00000454299 RIMBP3CA6NJZ7 1639 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 RIMBP3BA6NNM3 1639 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 RIMBP3Q9UFD9 1639 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 ZNF211Q13398 564 aaPredicted RBP9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 SETDB1Q15047 1291 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 POLIQ9UNA4 740 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 PPME1Q9Y570 386 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 URB2Q14146 1524 aaKnown RBP9.87□□□□□ -0.83
RAB28P2-201ENST00000454299 ALX3O95076 343 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 KIF4AO95239 1232 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 RPLP1P05386 114 aaKnown RBP9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 ACPPP15309 386 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 CES1P23141 567 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 MZF1P28698 734 aaPredicted RBP9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 C1orf127Q8N9H9 656 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
RAB28P2-201ENST00000454299 CDC27P30260 824 aa9.85□□□□□ -0.83
RAB28P2-201ENST00000454299 ZMYM1Q5SVZ6 1142 aa9.85□□□□□ -0.83
RAB28P2-201ENST00000454299 ADAMTSL4Q6UY14 1074 aa9.85□□□□□ -0.83
RAB28P2-201ENST00000454299 PBX4Q9BYU1 374 aa9.85□□□□□ -0.83
RAB28P2-201ENST00000454299 ARHGEF11O15085 1522 aa9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 PRSS36Q5K4E3 855 aa9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 ALKBH2Q6NS38 261 aa9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 CEP120Q8N960 986 aa9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 CARD10Q9BWT7 1032 aa9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
RAB28P2-201ENST00000454299 Q8N3U1 123 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 GALNT11Q8NCW6 608 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 MEGF10Q96KG7 1140 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 SSBP4Q9BWG4 385 aaPredicted RBP9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 MUC3BQ9H195 1237 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 AKTIPQ9H8T0 292 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 IFT140Q96RY7 1462 aa9.83□□□□□ -0.84
RAB28P2-201ENST00000454299 FAM177BA6PVY3 158 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 TRPA1O75762 1119 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 FAM13AO94988 1023 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 XP32Q5T750 250 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 XKR5Q6UX68 686 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 MAP4K3Q8IVH8 894 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 CACTIN-AS1Q8N1I8 211 aa9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 AGGF1Q8N302 714 aaeCLIP9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 POP1Q99575 1024 aaKnown RBP9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
RAB28P2-201ENST00000454299 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 H2AFB2P0C5Z0 115 aa9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 PTPRAP18433 802 aa9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 EPHA1P21709 976 aa9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 FKBP4Q02790 459 aaKnown RBP eCLIP9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 SALL4Q9UJQ4 1053 aa9.81□□□□□ -0.84
RAB28P2-201ENST00000454299 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
RAB28P2-201ENST00000454299 FAM117BQ6P1L5 589 aa9.8□□□□□ -0.84
RAB28P2-201ENST00000454299 CHRDQ9H2X0 955 aa9.8□□□□□ -0.84
RAB28P2-201ENST00000454299 CCDC87Q9NVE4 849 aa9.8□□□□□ -0.84
RAB28P2-201ENST00000454299 TOP2BQ02880 1626 aa9.8□□□□□ -0.84
RAB28P2-201ENST00000454299 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 EREGO14944 169 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 FZD6O60353 706 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 HHIPQ96QV1 700 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 FOXD3Q9UJU5 478 aaPredicted RBP9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
RAB28P2-201ENST00000454299 FSCN2O14926 492 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 PHACTR2O75167 634 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 WISP1O95388 367 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 GLB1P16278 677 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 NPR3P17342 541 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 CD68P34810 354 aaPredicted RBP9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 DZANK1Q9NVP4 752 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 BIVM-ERCC5R4GMW8 1640 aa9.78□□□□□ -0.84
RAB28P2-201ENST00000454299 ZNF608Q9ULD9 1512 aaPredicted RBP9.77□□□□□ -0.84
RAB28P2-201ENST00000454299 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 DDX3YO15523 660 aaKnown RBP9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 TNFRSF21O75509 655 aa9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 SERPINB4P48594 390 aa9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 ACAD11Q709F0 780 aa9.77□□□□□ -0.85
RAB28P2-201ENST00000454299 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 PDE2AO00408 941 aaPredicted RBP9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 TMEM130Q8N3G9 435 aa9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
RAB28P2-201ENST00000454299 H3BRB1 525 aa9.75□□□□□ -0.85
RAB28P2-201ENST00000454299 NFKBIEO00221 500 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms