RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NAALADL2Q58DX5 795 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 TTC39BQ5VTQ0 682 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 PEAR1Q5VY43 1037 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 MDFIQ99750 246 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 TGIF2Q9GZN2 237 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 MARK1Q9P0L2 795 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 ZFATQ9P243 1243 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 SALL4Q9UJQ4 1053 aa5.98□□□□□ -1.45
HMGB1P15-201ENST00000453854 MMP20O60882 483 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 KIF4AO95239 1232 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 CYP2E1P05181 493 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 EDN3P14138 238 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 SOX18P35713 384 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 GRM2Q14416 872 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 NXPE4Q6UWF7 544 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 TRIM11Q96F44 468 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 SLC30A3Q99726 388 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 BCO2Q9BYV7 579 aa5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 AVENQ9NQS1 362 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P15-201ENST00000453854 A0A1W2PP55 124 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 C1QTNF9BB2RNN3 333 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 CHRNA4P43681 627 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 BAG6P46379 1132 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 TAF1CQ15572 869 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 SYT9Q86SS6 491 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 CD163Q86VB7 1156 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 ANKRD24Q8TF21 1146 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 SREK1Q8WXA9 508 aaKnown RBP5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 TLR7Q9NYK1 1049 aaKnown RBP5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 PRR12Q9ULL5 1215 aa5.96□□□□□ -1.46
HMGB1P15-201ENST00000453854 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 USP17L7P0C7H9 530 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 SPEM2Q0P670 501 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 MEI1Q5TIA1 1274 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 PRPF40BQ6NWY9 871 aaKnown RBP5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 ALYREFQ86V81 257 aaKnown RBP5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 TINF2Q9BSI4 451 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 DDX41Q9UJV9 622 aaKnown RBP5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 TRAK1Q9UPV9 953 aa5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P15-201ENST00000453854 GADD45BO75293 160 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 FURINP09958 794 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 RARAP10276 462 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 KRT25Q7Z3Z0 450 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 RAB44Q7Z6P3 723 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 SLC43A3Q8NBI5 491 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 C3orf58Q8NDZ4 430 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 SRA1Q9HD15 236 aaKnown RBP5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 LATS2Q9NRM7 1088 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 STARD13Q9Y3M8 1113 aa5.94□□□□□ -1.46
HMGB1P15-201ENST00000453854 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 ELOA3DA6NLF2 546 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 NFKB1P19838 968 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 GSTT1P30711 240 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 RACK1P63244 317 aaKnown RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 COL9A3Q14050 684 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 ELOA3BQ3SY89 546 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 COL13A1Q5TAT6 717 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 HS2ST1Q7LGA3 356 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 ERMP1Q7Z2K6 904 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 CEP120Q8N960 986 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 ELOA3Q8NG57 546 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 TCF12Q99081 682 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 KANSL3Q9P2N6 904 aa5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P15-201ENST00000453854 SIN3BO75182 1162 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 PSAPP07602 524 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 XRCC5P13010 732 aaKnown RBP5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 NRLP54845 237 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 PLAURQ03405 335 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 HYAL2Q12891 473 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 C8orf86Q6ZUL3 223 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 CCNJLQ8IV13 435 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 EHD4Q9H223 541 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 ABCB6Q9NP58 842 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 PPP4R2Q9NY27 417 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 PPM1HQ9ULR3 514 aa5.92□□□□□ -1.46
HMGB1P15-201ENST00000453854 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 K7ELQ4 463 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 NFKBIEO00221 500 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ITGB7P26010 798 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ZNF394Q53GI3 561 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 TRPM4Q8TD43 1214 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 BHMTQ93088 406 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 GMLQ99445 158 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ZKSCAN3Q9BRR0 538 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 ACBD3Q9H3P7 528 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 CCSER2Q9H7U1 834 aa5.91□□□□□ -1.46
HMGB1P15-201ENST00000453854 DZANK1Q9NVP4 752 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms