RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 PTPN12Q05209 780 aaKnown RBP28.19■■■□□ 2.1
TNFRSF25-208ENST00000453341 RUNDC1Q96C34 613 aa28.19■■■□□ 2.1
TNFRSF25-208ENST00000453341 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
TNFRSF25-208ENST00000453341 SPEF2Q9C093 1822 aa28.18■■■□□ 2.1
TNFRSF25-208ENST00000453341 SREBF2Q12772 1141 aa28.18■■■□□ 2.1
TNFRSF25-208ENST00000453341 RALBP1Q15311 655 aa28.17■■■□□ 2.1
TNFRSF25-208ENST00000453341 CWC25Q9NXE8 425 aaPredicted RBP28.17■■■□□ 2.1
TNFRSF25-208ENST00000453341 SASH1O94885 1247 aa28.16■■■□□ 2.1
TNFRSF25-208ENST00000453341 NF2P35240 595 aa28.16■■■□□ 2.1
TNFRSF25-208ENST00000453341 PRKG1Q13976 671 aa28.16■■■□□ 2.1
TNFRSF25-208ENST00000453341 MINPP1Q9UNW1 487 aa28.16■■■□□ 2.1
TNFRSF25-208ENST00000453341 OGFOD1Q8N543 542 aa28.15■■■□□ 2.1
TNFRSF25-208ENST00000453341 KIAA0100Q14667 2235 aaKnown RBP28.15■■■□□ 2.1
TNFRSF25-208ENST00000453341 FBXW7Q969H0 707 aa28.14■■■□□ 2.1
TNFRSF25-208ENST00000453341 BRCA2P51587 3418 aa28.14■■■□□ 2.1
TNFRSF25-208ENST00000453341 ZNF853P0CG23 659 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 CTSWP56202 376 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 LDLRAD1Q5T700 205 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 STRIP1Q5VSL9 837 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 SPRYD7Q5W111 196 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 TXNRD3Q86VQ6 643 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 CDC5LQ99459 802 aaKnown RBP28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 METTL22Q9BUU2 404 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 FZD1Q9UP38 647 aa28.13■■■□□ 2.09
TNFRSF25-208ENST00000453341 MYH3P11055 1940 aa28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 ELL2O00472 640 aaPredicted RBP28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 ARMC9Q7Z3E5 817 aa28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 GCC1Q96CN9 775 aa28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 BSDC1Q9NW68 430 aaPredicted RBP28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 MYO3BQ8WXR4 1341 aa28.12■■■□□ 2.09
TNFRSF25-208ENST00000453341 CCT4P50991 539 aaKnown RBP28.11■■■□□ 2.09
TNFRSF25-208ENST00000453341 COA1Q9GZY4 146 aa28.11■■■□□ 2.09
TNFRSF25-208ENST00000453341 GREM2Q9H772 168 aa28.11■■■□□ 2.09
TNFRSF25-208ENST00000453341 TTLL11Q8NHH1 800 aa28.1■■■□□ 2.09
TNFRSF25-208ENST00000453341 ZBED3Q96IU2 234 aaPredicted RBP28.1■■■□□ 2.09
TNFRSF25-208ENST00000453341 ANGEL1Q9UNK9 670 aaKnown RBP28.1■■■□□ 2.09
TNFRSF25-208ENST00000453341 POTEFA5A3E0 1075 aa28.09■■■□□ 2.09
TNFRSF25-208ENST00000453341 HABP4Q5JVS0 413 aaKnown RBP28.09■■■□□ 2.09
TNFRSF25-208ENST00000453341 ADAMTS8Q9UP79 889 aa28.09■■■□□ 2.09
TNFRSF25-208ENST00000453341 KLRK1P26718 216 aa28.08■■■□□ 2.09
TNFRSF25-208ENST00000453341 APOBEC3FQ8IUX4 373 aaKnown RBP28.08■■■□□ 2.09
TNFRSF25-208ENST00000453341 TRIM17Q9Y577 477 aa28.08■■■□□ 2.09
TNFRSF25-208ENST00000453341 ALDH1A1P00352 501 aa28.07■■■□□ 2.08
TNFRSF25-208ENST00000453341 IGKV5-2P06315 115 aa28.07■■■□□ 2.08
TNFRSF25-208ENST00000453341 OTOP1Q7RTM1 612 aa28.07■■■□□ 2.08
TNFRSF25-208ENST00000453341 IFNL1Q8IU54 200 aa28.07■■■□□ 2.08
TNFRSF25-208ENST00000453341 KIAA0825Q8IV33 1275 aa28.07■■■□□ 2.08
TNFRSF25-208ENST00000453341 WDR43Q15061 677 aaKnown RBP eCLIP28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 TTLL5Q6EMB2 1281 aa28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 MAP3K2Q9Y2U5 619 aa28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 MYBBP1AQ9BQG0 1328 aaKnown RBP28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 SSC5DA1L4H1 1573 aa28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 LAMB1P07942 1786 aa28.06■■■□□ 2.08
TNFRSF25-208ENST00000453341 MMP14P50281 582 aa28.05■■■□□ 2.08
TNFRSF25-208ENST00000453341 C8orf58Q8NAV2 365 aa28.05■■■□□ 2.08
TNFRSF25-208ENST00000453341 IFT57Q9NWB7 429 aa28.05■■■□□ 2.08
TNFRSF25-208ENST00000453341 MANSC4A6NHS7 340 aaPredicted RBP28.04■■■□□ 2.08
TNFRSF25-208ENST00000453341 IGF2BP3O00425 579 aaKnown RBP eCLIP28.04■■■□□ 2.08
TNFRSF25-208ENST00000453341 CLMNQ96JQ2 1002 aa28.04■■■□□ 2.08
TNFRSF25-208ENST00000453341 LEMD3Q9Y2U8 911 aa28.04■■■□□ 2.08
TNFRSF25-208ENST00000453341 RBBP6Q7Z6E9 1792 aaKnown RBP28.04■■■□□ 2.08
TNFRSF25-208ENST00000453341 COL1A1P02452 1464 aaPredicted RBP28.03■■■□□ 2.08
TNFRSF25-208ENST00000453341 DDX58O95786 925 aaKnown RBP28.03■■■□□ 2.08
TNFRSF25-208ENST00000453341 MAP3K11Q16584 847 aa28.03■■■□□ 2.08
TNFRSF25-208ENST00000453341 DEFB129Q9H1M3 183 aa28.03■■■□□ 2.08
TNFRSF25-208ENST00000453341 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.03■■■□□ 2.08
TNFRSF25-208ENST00000453341 GTF2IP78347 998 aa28.02■■■□□ 2.08
TNFRSF25-208ENST00000453341 SLC10A4Q96EP9 437 aa28.02■■■□□ 2.08
TNFRSF25-208ENST00000453341 CEP290O15078 2479 aa28.01■■■□□ 2.08
TNFRSF25-208ENST00000453341 ZNF804BA4D1E1 1349 aa28.01■■■□□ 2.07
TNFRSF25-208ENST00000453341 INHBEP58166 350 aa28.01■■■□□ 2.07
TNFRSF25-208ENST00000453341 INTS3Q68E01 1043 aaKnown RBP28.01■■■□□ 2.07
TNFRSF25-208ENST00000453341 WNK4Q96J92 1243 aa28.01■■■□□ 2.07
TNFRSF25-208ENST00000453341 PI4KAP2A4QPH2 592 aa28■■■□□ 2.07
TNFRSF25-208ENST00000453341 ZBTB48P10074 688 aaPredicted RBP28■■■□□ 2.07
TNFRSF25-208ENST00000453341 GNAI1P63096 354 aa28■■■□□ 2.07
TNFRSF25-208ENST00000453341 CWF19L2Q2TBE0 894 aaKnown RBP28■■■□□ 2.07
TNFRSF25-208ENST00000453341 KSR2Q6VAB6 950 aa28■■■□□ 2.07
TNFRSF25-208ENST00000453341 PI4KAP1Q8N8J0 262 aa28■■■□□ 2.07
TNFRSF25-208ENST00000453341 PCDHAC2Q9Y5I4 1007 aa28■■■□□ 2.07
TNFRSF25-208ENST00000453341 CCDC30Q5VVM6 783 aa27.99■■■□□ 2.07
TNFRSF25-208ENST00000453341 PTPN22Q9Y2R2 807 aa27.99■■■□□ 2.07
TNFRSF25-208ENST00000453341 ECM29Q5VYK3 1845 aa27.99■■■□□ 2.07
TNFRSF25-208ENST00000453341 IGHMBP2P38935 993 aaKnown RBP27.98■■■□□ 2.07
TNFRSF25-208ENST00000453341 CERS5Q8N5B7 392 aa27.98■■■□□ 2.07
TNFRSF25-208ENST00000453341 CD99L2Q8TCZ2 262 aa27.98■■■□□ 2.07
TNFRSF25-208ENST00000453341 GJA5P36382 358 aa27.97■■■□□ 2.07
TNFRSF25-208ENST00000453341 CAP1Q01518 475 aa27.97■■■□□ 2.07
TNFRSF25-208ENST00000453341 TSPYL6Q8N831 410 aa27.97■■■□□ 2.07
TNFRSF25-208ENST00000453341 NEURL1BA8MQ27 555 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 H7C1W4 665 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 DLGAP5Q15398 846 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 UBE3BQ7Z3V4 1068 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 ERO1AQ96HE7 468 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 CD209Q9NNX6 404 aa27.96■■■□□ 2.07
TNFRSF25-208ENST00000453341 EN2P19622 333 aaPredicted RBP27.95■■■□□ 2.06
TNFRSF25-208ENST00000453341 ITGA6P23229 1130 aa27.95■■■□□ 2.06
TNFRSF25-208ENST00000453341 CRHR2Q13324 411 aa27.95■■■□□ 2.06
TNFRSF25-208ENST00000453341 MTMR14Q8NCE2 650 aa27.95■■■□□ 2.06
TNFRSF25-208ENST00000453341 ARMC5Q96C12 935 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms