RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 CA12O43570 354 aa23.41■■□□□ 1.34
TNFRSF25-207ENST00000453260 CSF1RP07333 972 aa23.41■■□□□ 1.34
TNFRSF25-207ENST00000453260 GBA2Q9HCG7 927 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF25-207ENST00000453260 GGA3Q9NZ52 723 aa23.41■■□□□ 1.34
TNFRSF25-207ENST00000453260 BRPF1P55201 1214 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF25-207ENST00000453260 NOGQ13253 232 aa23.4■■□□□ 1.34
TNFRSF25-207ENST00000453260 SCARF1Q14162 830 aa23.4■■□□□ 1.34
TNFRSF25-207ENST00000453260 GMLQ99445 158 aa23.4■■□□□ 1.34
TNFRSF25-207ENST00000453260 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
TNFRSF25-207ENST00000453260 ANKRD18BA2A2Z9 1011 aa23.39■■□□□ 1.33
TNFRSF25-207ENST00000453260 ADM5C9JUS6 153 aa23.39■■□□□ 1.33
TNFRSF25-207ENST00000453260 CASP7P55210 303 aa23.39■■□□□ 1.33
TNFRSF25-207ENST00000453260 OGFOD1Q8N543 542 aa23.39■■□□□ 1.33
TNFRSF25-207ENST00000453260 MYOZ2Q9NPC6 264 aa23.39■■□□□ 1.33
TNFRSF25-207ENST00000453260 ZNF804BA4D1E1 1349 aa23.38■■□□□ 1.33
TNFRSF25-207ENST00000453260 WTIPA6NIX2 430 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF25-207ENST00000453260 KCNJ4P48050 445 aa23.38■■□□□ 1.33
TNFRSF25-207ENST00000453260 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
TNFRSF25-207ENST00000453260 DLK2Q6UY11 383 aa23.38■■□□□ 1.33
TNFRSF25-207ENST00000453260 MYO3BQ8WXR4 1341 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 MMP14P50281 582 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 STRIP1Q5VSL9 837 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 RGMBQ6NW40 437 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 FBXW7Q969H0 707 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 CCDC102AQ96A19 550 aa23.37■■□□□ 1.33
TNFRSF25-207ENST00000453260 F6X3S4 739 aa23.36■■□□□ 1.33
TNFRSF25-207ENST00000453260 IFIT5Q13325 482 aaKnown RBP23.36■■□□□ 1.33
TNFRSF25-207ENST00000453260 BEND3Q5T5X7 828 aa23.36■■□□□ 1.33
TNFRSF25-207ENST00000453260 SPINK5Q9NQ38 1064 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF25-207ENST00000453260 CHMP3Q9Y3E7 222 aa23.35■■□□□ 1.33
TNFRSF25-207ENST00000453260 PITPNM2Q9BZ72 1349 aa23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 ZNF157P51786 506 aaPredicted RBP23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 CHRNDQ07001 517 aa23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 DACT2Q5SW24 774 aa23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 TTLL5Q6EMB2 1281 aa23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 CDCA5Q96FF9 252 aa23.34■■□□□ 1.33
TNFRSF25-207ENST00000453260 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF25-207ENST00000453260 TXNRD3Q86VQ6 643 aa23.33■■□□□ 1.33
TNFRSF25-207ENST00000453260 C9orf78Q9NZ63 289 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF25-207ENST00000453260 FKBP1BP68106 108 aa23.32■■□□□ 1.32
TNFRSF25-207ENST00000453260 FOXO4P98177 505 aa23.32■■□□□ 1.32
TNFRSF25-207ENST00000453260 TSKSQ9UJT2 592 aa23.32■■□□□ 1.32
TNFRSF25-207ENST00000453260 GRM8O00222 908 aa23.31■■□□□ 1.32
TNFRSF25-207ENST00000453260 CCDC57Q2TAC2 916 aa23.31■■□□□ 1.32
TNFRSF25-207ENST00000453260 HDAC9Q9UKV0 1011 aa23.31■■□□□ 1.32
TNFRSF25-207ENST00000453260 ALDH1L1O75891 902 aa23.3■■□□□ 1.32
TNFRSF25-207ENST00000453260 TAF7LQ5H9L4 462 aa23.3■■□□□ 1.32
TNFRSF25-207ENST00000453260 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
TNFRSF25-207ENST00000453260 LMBR1LQ6UX01 489 aa23.3■■□□□ 1.32
TNFRSF25-207ENST00000453260 MXD3Q9BW11 206 aa23.3■■□□□ 1.32
TNFRSF25-207ENST00000453260 FAM155AB1AL88 458 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF25-207ENST00000453260 GTF2IP78347 998 aa23.29■■□□□ 1.32
TNFRSF25-207ENST00000453260 NBPF9Q3BBW0 867 aa23.29■■□□□ 1.32
TNFRSF25-207ENST00000453260 SRCIN1Q9C0H9 1055 aa23.29■■□□□ 1.32
TNFRSF25-207ENST00000453260 TAF5LO75529 589 aa23.28■■□□□ 1.32
TNFRSF25-207ENST00000453260 ABHD8Q96I13 439 aa23.28■■□□□ 1.32
TNFRSF25-207ENST00000453260 ZIC5Q96T25 663 aa23.28■■□□□ 1.32
TNFRSF25-207ENST00000453260 CD209Q9NNX6 404 aa23.28■■□□□ 1.32
TNFRSF25-207ENST00000453260 WNT10BO00744 389 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 KLRK1P26718 216 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 NF2P35240 595 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 KIF23Q02241 960 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 LDHAL6AQ6ZMR3 332 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 C15orf52Q6ZUT6 534 aaKnown RBP23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 ZNF804AQ7Z570 1209 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 REM2Q8IYK8 340 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
TNFRSF25-207ENST00000453260 SLC10A3P09131 477 aa23.26■■□□□ 1.31
TNFRSF25-207ENST00000453260 KIAA0825Q8IV33 1275 aa23.26■■□□□ 1.31
TNFRSF25-207ENST00000453260 CNNM1Q9NRU3 951 aa23.26■■□□□ 1.31
TNFRSF25-207ENST00000453260 SAGE1Q9NXZ1 904 aa23.25■■□□□ 1.31
TNFRSF25-207ENST00000453260 AKAP11Q9UKA4 1901 aa23.24■■□□□ 1.31
TNFRSF25-207ENST00000453260 EPHA10Q5JZY3 1008 aa23.24■■□□□ 1.31
TNFRSF25-207ENST00000453260 ZNF521Q96K83 1311 aa23.24■■□□□ 1.31
TNFRSF25-207ENST00000453260 PAPPA2Q9BXP8 1791 aa23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 PLIN1O60240 522 aa23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 TTLL12Q14166 644 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 APOBEC3FQ8IUX4 373 aaKnown RBP23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 SCAF8Q9UPN6 1271 aaKnown RBP23.23■■□□□ 1.31
TNFRSF25-207ENST00000453260 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF25-207ENST00000453260 E9PSI1 815 aa23.22■■□□□ 1.31
TNFRSF25-207ENST00000453260 SNAP23O00161 211 aa23.22■■□□□ 1.31
TNFRSF25-207ENST00000453260 SASH1O94885 1247 aa23.22■■□□□ 1.31
TNFRSF25-207ENST00000453260 IL1R1P14778 569 aa23.22■■□□□ 1.31
TNFRSF25-207ENST00000453260 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
TNFRSF25-207ENST00000453260 PRAMEF18Q5VWM3 479 aa23.21■■□□□ 1.31
TNFRSF25-207ENST00000453260 CSRNP1Q96S65 589 aa23.21■■□□□ 1.31
TNFRSF25-207ENST00000453260 IRS2Q9Y4H2 1338 aa23.2■■□□□ 1.3
TNFRSF25-207ENST00000453260 TRPA1O75762 1119 aa23.2■■□□□ 1.3
TNFRSF25-207ENST00000453260 FKBP1AP62942 108 aaKnown RBP23.2■■□□□ 1.3
TNFRSF25-207ENST00000453260 RASAL3Q86YV0 1011 aa23.2■■□□□ 1.3
TNFRSF25-207ENST00000453260 RNF186Q9NXI6 227 aa23.2■■□□□ 1.3
TNFRSF25-207ENST00000453260 PTPRCP08575 1304 aa23.19■■□□□ 1.3
TNFRSF25-207ENST00000453260 CCDC85CA6NKD9 419 aa23.19■■□□□ 1.3
TNFRSF25-207ENST00000453260 UBE2Q2LH0YL09 131 aa23.19■■□□□ 1.3
TNFRSF25-207ENST00000453260 MYO1BO43795 1136 aa23.19■■□□□ 1.3
TNFRSF25-207ENST00000453260 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms