RNA–Protein interactions for RNA: ENST00000453184.2

IGKV1D-27-201, Transcript of immunoglobulin kappa variable 1D-27 (pseudogene), humanhuman

BASIC

Gene IGKV1D-27, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-27-201ENST00000453184 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
IGKV1D-27-201ENST00000453184 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
IGKV1D-27-201ENST00000453184 DPF2Q92785 391 aa13.07□□□□□ -0.32
IGKV1D-27-201ENST00000453184 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
IGKV1D-27-201ENST00000453184 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
IGKV1D-27-201ENST00000453184 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 PLIN1O60240 522 aa13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 LRRC24Q50LG9 513 aa13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
IGKV1D-27-201ENST00000453184 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 RLBP1P12271 317 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 APLP1P51693 650 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 RSBN1LQ6PCB5 846 aaPredicted RBP13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
IGKV1D-27-201ENST00000453184 H7C1D1 291 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 EYA2O00167 538 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 MTX1Q13505 466 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 METTL24Q5JXM2 366 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 DACT2Q5SW24 774 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 AGBL3Q8NEM8 1001 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 GMLQ99445 158 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 RCAN3Q9UKA8 241 aa13.04□□□□□ -0.32
IGKV1D-27-201ENST00000453184 PDE8BO95263 885 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 GNAI2P04899 355 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
IGKV1D-27-201ENST00000453184 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.32
IGKV1D-27-201ENST00000453184 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 CIAO1O76071 339 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 EGFRP00533 1210 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 IL1R1P14778 569 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 CNTROBQ8N137 903 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MYO3BQ8WXR4 1341 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FGFR2P21802 821 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 GTF2IP78347 998 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 HTRA3P83110 453 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 TBC1D10BQ4KMP7 808 aaPredicted RBP13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 TTLL5Q6EMB2 1281 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ZC3H15Q8WU90 426 aaKnown RBP13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 SIL1Q9H173 461 aa13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
IGKV1D-27-201ENST00000453184 POLR2AP24928 1970 aaKnown RBP13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 USP17L8P0C7I0 530 aa13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 GYG1P46976 350 aa13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PUM3Q15397 648 aaKnown RBP13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PNMA6EA0A0J9YXQ4 647 aa12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MS4A1P11836 297 aa12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MYOZ2Q9NPC6 264 aa12.99□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 SASH1O94885 1247 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 LPIN2Q92539 896 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 PCNTO95613 3336 aa12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 TRAF5O00463 557 aa12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 SLC5A1P13866 664 aa12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 MMP14P50281 582 aa12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
IGKV1D-27-201ENST00000453184 ATP2B3Q16720 1220 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms