RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 EAF2Q96CJ1 260 aaPredicted RBP23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 RBM17Q96I25 401 aaKnown RBP23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 CRAMP1Q96RY5 1269 aa23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 PSMD1Q99460 953 aa23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 IGHMBP2P38935 993 aaKnown RBP23.85■■□□□ 1.41
HIGD1A-204ENST00000452906 CNTROBQ8N137 903 aa23.85■■□□□ 1.41
HIGD1A-204ENST00000452906 MROH5Q6ZUA9 1318 aa23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 IQCA1LA6NCM1 817 aa23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 PI4K2BQ8TCG2 481 aa23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 ZNF594Q96JF6 807 aaPredicted RBP23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 L3MBTL3Q96JM7 780 aaPredicted RBP23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 ZNF277Q9NRM2 450 aaPredicted RBP23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 CNNM1Q9NRU3 951 aa23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 SPEF2Q9C093 1822 aa23.84■■□□□ 1.41
HIGD1A-204ENST00000452906 TRIM6-TRIM34B2RNG4 842 aa23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 DDNO94850 711 aaPredicted RBP23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 OLFM4Q6UX06 510 aa23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 CCDC85AQ96PX6 553 aaPredicted RBP23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 MPHOSPH8Q99549 860 aa23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 TMX4Q9H1E5 349 aaPredicted RBP23.83■■□□□ 1.41
HIGD1A-204ENST00000452906 ARAP2Q8WZ64 1704 aa23.82■■□□□ 1.4
HIGD1A-204ENST00000452906 IARSP41252 1262 aaKnown RBP23.82■■□□□ 1.4
HIGD1A-204ENST00000452906 LRRC24Q50LG9 513 aa23.82■■□□□ 1.4
HIGD1A-204ENST00000452906 METTL24Q5JXM2 366 aa23.82■■□□□ 1.4
HIGD1A-204ENST00000452906 TBC1D9Q6ZT07 1266 aa23.82■■□□□ 1.4
HIGD1A-204ENST00000452906 CCDC8Q9H0W5 538 aaPredicted RBP23.81■■□□□ 1.4
HIGD1A-204ENST00000452906 RIPOR2Q9Y4F9 1068 aa23.81■■□□□ 1.4
HIGD1A-204ENST00000452906 KLRG1Q96E93 195 aa23.8■■□□□ 1.4
HIGD1A-204ENST00000452906 FZD9O00144 591 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 PPEF1O14829 653 aaPredicted RBP23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 ATP5JP18859 108 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 TSHZ3Q63HK5 1081 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 TICAM2Q86XR7 235 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 RILPL2Q969X0 211 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 EVI5LQ96CN4 794 aa23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 PUS3Q9BZE2 481 aaKnown RBP23.79■■□□□ 1.4
HIGD1A-204ENST00000452906 HIP1O00291 1037 aa23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 C3orf67Q6ZVT6 689 aa23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 JDP2Q8WYK2 163 aa23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 DBNLQ9UJU6 430 aaKnown RBP23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 ZNF541Q9H0D2 1346 aa23.78■■□□□ 1.4
HIGD1A-204ENST00000452906 A0A1B0GUL7 405 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 REC8O95072 547 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 HTRA3P83110 453 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 ATP2B3Q16720 1220 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 CHADLQ6NUI6 762 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 DDX46Q7L014 1031 aaKnown RBP23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 NEUROD6Q96NK8 337 aa23.77■■□□□ 1.4
HIGD1A-204ENST00000452906 A0A1B0GUL6 1792 aa23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 MFAP1P55081 439 aaKnown RBP23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 CCDC158Q5M9N0 1113 aa23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 GORABQ5T7V8 394 aa23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 JMYQ8N9B5 988 aa23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 RFX7Q2KHR2 1363 aa23.76■■□□□ 1.39
HIGD1A-204ENST00000452906 PDE8BO95263 885 aa23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 PUM3Q15397 648 aaKnown RBP23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 GPC2Q8N158 579 aa23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 DDRGK1Q96HY6 314 aa23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 DBNDD2Q9BQY9 259 aa23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 TAF1DQ9H5J8 278 aaPredicted RBP23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 TLR7Q9NYK1 1049 aaKnown RBP23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 ATP6V0A2Q9Y487 856 aa23.75■■□□□ 1.39
HIGD1A-204ENST00000452906 ADAMTSL1Q8N6G6 1762 aa23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 BBOX1O75936 387 aa23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 LDHDQ86WU2 507 aa23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 RUFY2Q8WXA3 655 aa23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 HACL1Q9UJ83 578 aa23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.74■■□□□ 1.39
HIGD1A-204ENST00000452906 SLC5A1P13866 664 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 VGLL2Q8N8G2 317 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 VPS33BQ9H267 617 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 BSDC1Q9NW68 430 aaPredicted RBP23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 COL4A5P29400 1685 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 TAF1P21675 1872 aa23.73■■□□□ 1.39
HIGD1A-204ENST00000452906 EPB41L2O43491 1005 aaKnown RBP23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 SEC24BO95487 1268 aa23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 TMC4Q7Z404 712 aa23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 LPIN2Q92539 896 aa23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 SEC31BQ9NQW1 1179 aa23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 LRRC37AA6NMS7 1700 aa23.72■■□□□ 1.39
HIGD1A-204ENST00000452906 CHMLP26374 656 aa23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 EIF6P56537 245 aaKnown RBP23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 TIMM10P62072 90 aa23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 LARGE2Q8N3Y3 721 aa23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 HAUS7Q99871 368 aa23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
HIGD1A-204ENST00000452906 IFIT1P09914 478 aaKnown RBP23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 POTEIP0CG38 1075 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 POTEJP0CG39 1038 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 GRAPQ13588 217 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 LRRFIP1Q32MZ4 808 aaKnown RBP23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 TTC39AQ5SRH9 613 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 PNMA8AQ86V59 439 aaPredicted RBP23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 SUPT20HQ8NEM7 779 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 GRAPLQ8TC17 118 aaPredicted RBP23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 XAGE2Q96GT9 111 aa23.7■■□□□ 1.38
HIGD1A-204ENST00000452906 BOLA2Q9H3K6 86 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms