RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 FSBPO95073 299 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 RWDD2BP57060 319 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 SCRN1Q12765 414 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 TMC6Q7Z403 805 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 YTHDF3Q7Z739 585 aaKnown RBP9.64□□□□□ -0.87
SMCO1-202ENST00000452776 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
SMCO1-202ENST00000452776 RILPL2Q969X0 211 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 MAGI1Q96QZ7 1491 aaPredicted RBP9.64□□□□□ -0.87
SMCO1-202ENST00000452776 EFCAB6Q5THR3 1501 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 ANKRD18BA2A2Z9 1011 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 IRF6O14896 467 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 SLC8A3P57103 927 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 GNG11P61952 73 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 DRP2Q13474 957 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 RBBP5Q15291 538 aaKnown RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ARMCX5Q6P1M9 558 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 OTUD6BQ8N6M0 293 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 FAXDC2Q96IV6 333 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 JPH2Q9BR39 696 aaPredicted RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 GGA2Q9UJY4 613 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ODF2LQ9ULJ1 636 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 TCHHQ07283 1943 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 RPGRIP1LQ68CZ1 1315 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 SALL3Q9BXA9 1300 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ABCA9Q8IUA7 1624 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ABCA6Q8N139 1617 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 EZRP15311 586 aaKnown RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ZKSCAN1P17029 563 aaPredicted RBP9.63□□□□□ -0.87
SMCO1-202ENST00000452776 GRIK3Q13003 919 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 CASP8Q14790 479 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 FOXR1Q6PIV2 292 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 TAX1BP1Q86VP1 789 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 CCDC83Q8IWF9 413 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 KCNB2Q92953 911 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 FAM204AQ9H8W3 233 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 HOMER3Q9NSC5 361 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 ETAA1Q9NY74 926 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 CHMP3Q9Y3E7 222 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 TRPM2O94759 1503 aa9.63□□□□□ -0.87
SMCO1-202ENST00000452776 IKBKBO14920 756 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 STX10O60499 249 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 NBPF7P0C2Y1 421 aaPredicted RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 LIG3P49916 1009 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 CCT4P50991 539 aaKnown RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 CDR1P51861 262 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 CPSF1Q10570 1443 aaKnown RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 SEMA3FQ13275 785 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 N4BP2L2Q92802 583 aaPredicted RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 BICC1Q9H694 974 aaKnown RBP9.62□□□□□ -0.87
SMCO1-202ENST00000452776 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 MYO6Q9UM54 1294 aa9.62□□□□□ -0.87
SMCO1-202ENST00000452776 SCP2P22307 547 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 SLC8A1P32418 973 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 DCTN1Q14203 1278 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 PDCD2Q16342 344 aaPredicted RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 CWC27Q6UX04 472 aaKnown RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 C11orf57Q6ZUT1 292 aaPredicted RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 ZNF579Q8NAF0 562 aaKnown RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 SLC12A5Q9H2X9 1139 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 CDC23Q9UJX2 597 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 RCOR1Q9UKL0 485 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 PPP2R2CQ9Y2T4 447 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 PNPLA6Q8IY17 1366 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 CUTAO60888 179 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 PRPHP41219 470 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 AMPHP49418 695 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 SMTNP53814 917 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 SLMAPQ14BN4 828 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 RCSD1Q6JBY9 416 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 KCNV1Q6PIU1 500 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 FAM76AQ8TAV0 307 aa9.61□□□□□ -0.87
SMCO1-202ENST00000452776 XPO4Q9C0E2 1151 aaKnown RBP9.61□□□□□ -0.87
SMCO1-202ENST00000452776 EVC2Q86UK5 1308 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 GOLGA6L7A0A1B0GV03 622 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 RNF40O75150 1001 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 GNAI2P04899 355 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 WHAMMP3Q1A5X7 153 aa9.6□□□□□ -0.87
SMCO1-202ENST00000452776 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
SMCO1-202ENST00000452776 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
SMCO1-202ENST00000452776 KAT2BQ92831 832 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms