RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 CAPNS2Q96L46 248 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 COA1Q9GZY4 146 aa16.31■□□□□ 0.2
CHD3-206ENST00000452447 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 CYP4F22Q6NT55 531 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 ZNF609O15014 1411 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 FOXN1O15353 648 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 ZNF280AP59817 542 aaPredicted RBP16.3■□□□□ 0.2
CHD3-206ENST00000452447 SLFN5Q08AF3 891 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 SULF1Q8IWU6 871 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
CHD3-206ENST00000452447 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
CHD3-206ENST00000452447 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 STRIP1Q5VSL9 837 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 GMLQ99445 158 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 MYOZ2Q9NPC6 264 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 GGA3Q9NZ52 723 aa16.29■□□□□ 0.2
CHD3-206ENST00000452447 PTPRCP08575 1304 aa16.28■□□□□ 0.2
CHD3-206ENST00000452447 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
CHD3-206ENST00000452447 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
CHD3-206ENST00000452447 SCARF1Q14162 830 aa16.28■□□□□ 0.2
CHD3-206ENST00000452447 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
CHD3-206ENST00000452447 ADM5C9JUS6 153 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 TAF5LO75529 589 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 KLRK1P26718 216 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 DACT2Q5SW24 774 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
CHD3-206ENST00000452447 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 HHIPL1Q96JK4 782 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
CHD3-206ENST00000452447 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
CHD3-206ENST00000452447 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
CHD3-206ENST00000452447 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
CHD3-206ENST00000452447 PLIN1O60240 522 aa16.26■□□□□ 0.19
CHD3-206ENST00000452447 NBPF7P0C2Y1 421 aaPredicted RBP16.26■□□□□ 0.19
CHD3-206ENST00000452447 MAP2K2P36507 400 aa16.26■□□□□ 0.19
CHD3-206ENST00000452447 HUNKP57058 714 aa16.26■□□□□ 0.19
CHD3-206ENST00000452447 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
CHD3-206ENST00000452447 GBA2Q9HCG7 927 aaPredicted RBP16.26■□□□□ 0.19
CHD3-206ENST00000452447 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
CHD3-206ENST00000452447 SNAP23O00161 211 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 GTF2IP78347 998 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 ALDH1L2Q3SY69 923 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 SUCLG2Q96I99 432 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 CD209Q9NNX6 404 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
CHD3-206ENST00000452447 A0A1B0GUL6 1792 aa16.24■□□□□ 0.19
CHD3-206ENST00000452447 AOC2O75106 756 aa16.24■□□□□ 0.19
CHD3-206ENST00000452447 MMP14P50281 582 aa16.24■□□□□ 0.19
CHD3-206ENST00000452447 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
CHD3-206ENST00000452447 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
CHD3-206ENST00000452447 UTYO14607 1347 aa16.23■□□□□ 0.19
CHD3-206ENST00000452447 LBX1P52954 281 aa16.23■□□□□ 0.19
CHD3-206ENST00000452447 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
CHD3-206ENST00000452447 HDAC9Q9UKV0 1011 aa16.23■□□□□ 0.19
CHD3-206ENST00000452447 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
CHD3-206ENST00000452447 NBPF9Q3BBW0 867 aa16.22■□□□□ 0.19
CHD3-206ENST00000452447 KIAA0825Q8IV33 1275 aa16.22■□□□□ 0.19
CHD3-206ENST00000452447 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
CHD3-206ENST00000452447 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
CHD3-206ENST00000452447 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
CHD3-206ENST00000452447 THSD7BQ9C0I4 1608 aa16.22■□□□□ 0.19
CHD3-206ENST00000452447 ZNF646O15015 1829 aaPredicted RBP16.22■□□□□ 0.19
CHD3-206ENST00000452447 WNT10BO00744 389 aa16.21■□□□□ 0.19
CHD3-206ENST00000452447 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.19
CHD3-206ENST00000452447 NOGQ13253 232 aa16.21■□□□□ 0.19
CHD3-206ENST00000452447 TRMT2AQ8IZ69 625 aaKnown RBP16.21■□□□□ 0.19
CHD3-206ENST00000452447 IRS2Q9Y4H2 1338 aa16.21■□□□□ 0.19
CHD3-206ENST00000452447 RGMBQ6NW40 437 aa16.21■□□□□ 0.18
CHD3-206ENST00000452447 HSPA8P11142 646 aaKnown RBP16.2■□□□□ 0.18
CHD3-206ENST00000452447 IL1R1P14778 569 aa16.2■□□□□ 0.18
CHD3-206ENST00000452447 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
CHD3-206ENST00000452447 CCDC102AQ96A19 550 aa16.2■□□□□ 0.18
CHD3-206ENST00000452447 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
CHD3-206ENST00000452447 CAPN15O75808 1086 aa16.19■□□□□ 0.18
CHD3-206ENST00000452447 ZNF157P51786 506 aaPredicted RBP16.19■□□□□ 0.18
CHD3-206ENST00000452447 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
CHD3-206ENST00000452447 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
CHD3-206ENST00000452447 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
CHD3-206ENST00000452447 SCAF8Q9UPN6 1271 aaKnown RBP16.19■□□□□ 0.18
CHD3-206ENST00000452447 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
CHD3-206ENST00000452447 CA12O43570 354 aa16.18■□□□□ 0.18
CHD3-206ENST00000452447 SASH1O94885 1247 aa16.18■□□□□ 0.18
CHD3-206ENST00000452447 FKBP1BP68106 108 aa16.18■□□□□ 0.18
CHD3-206ENST00000452447 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
CHD3-206ENST00000452447 ANKRD44Q8N8A2 993 aa16.17■□□□□ 0.18
CHD3-206ENST00000452447 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
CHD3-206ENST00000452447 JAG2Q9Y219 1238 aa16.17■□□□□ 0.18
CHD3-206ENST00000452447 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms