RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SCARF1Q14162 830 aa34.6■■■■□ 3.13
USP42-204ENST00000451154 FAM161AQ3B820 660 aa34.6■■■■□ 3.13
USP42-204ENST00000451154 TSKSQ9UJT2 592 aa34.59■■■■□ 3.13
USP42-204ENST00000451154 PSME4Q14997 1843 aa34.59■■■■□ 3.13
USP42-204ENST00000451154 F6X3S4 739 aa34.58■■■■□ 3.13
USP42-204ENST00000451154 USP17L8P0C7I0 530 aa34.58■■■■□ 3.13
USP42-204ENST00000451154 TXNRD3Q86VQ6 643 aa34.58■■■■□ 3.13
USP42-204ENST00000451154 SULF1Q8IWU6 871 aa34.58■■■■□ 3.13
USP42-204ENST00000451154 GBA2Q9HCG7 927 aaPredicted RBP34.58■■■■□ 3.13
USP42-204ENST00000451154 MED23Q9ULK4 1368 aa34.58■■■■□ 3.13
USP42-204ENST00000451154 C2orf69Q8N8R5 385 aa34.57■■■■□ 3.12
USP42-204ENST00000451154 MPHOSPH8Q99549 860 aa34.57■■■■□ 3.12
USP42-204ENST00000451154 LEMD3Q9Y2U8 911 aa34.57■■■■□ 3.12
USP42-204ENST00000451154 ZIC5Q96T25 663 aa34.56■■■■□ 3.12
USP42-204ENST00000451154 MXD3Q9BW11 206 aa34.56■■■■□ 3.12
USP42-204ENST00000451154 MYOZ2Q9NPC6 264 aa34.56■■■■□ 3.12
USP42-204ENST00000451154 ANGEL2Q5VTE6 544 aaKnown RBP34.55■■■■□ 3.12
USP42-204ENST00000451154 FBXW7Q969H0 707 aa34.55■■■■□ 3.12
USP42-204ENST00000451154 ZNF609O15014 1411 aa34.55■■■■□ 3.12
USP42-204ENST00000451154 ANKRD2Q9GZV1 360 aa34.54■■■■□ 3.12
USP42-204ENST00000451154 BRPF1P55201 1214 aaPredicted RBP34.53■■■■□ 3.12
USP42-204ENST00000451154 DACT2Q5SW24 774 aa34.53■■■■□ 3.12
USP42-204ENST00000451154 BEND3Q5T5X7 828 aa34.53■■■■□ 3.12
USP42-204ENST00000451154 COA1Q9GZY4 146 aa34.53■■■■□ 3.12
USP42-204ENST00000451154 ZNF804BA4D1E1 1349 aa34.53■■■■□ 3.12
USP42-204ENST00000451154 KLRK1P26718 216 aa34.52■■■■□ 3.12
USP42-204ENST00000451154 RGMBQ6NW40 437 aa34.52■■■■□ 3.12
USP42-204ENST00000451154 CDCA5Q96FF9 252 aa34.52■■■■□ 3.12
USP42-204ENST00000451154 ANKRD18BA2A2Z9 1011 aa34.51■■■■□ 3.12
USP42-204ENST00000451154 FOXO4P98177 505 aa34.51■■■■□ 3.12
USP42-204ENST00000451154 NOGQ13253 232 aa34.51■■■■□ 3.12
USP42-204ENST00000451154 CHRNDQ07001 517 aa34.5■■■■□ 3.11
USP42-204ENST00000451154 SCAF8Q9UPN6 1271 aaKnown RBP34.5■■■■□ 3.11
USP42-204ENST00000451154 STRIP1Q5VSL9 837 aa34.49■■■■□ 3.11
USP42-204ENST00000451154 FAM155AB1AL88 458 aaPredicted RBP34.48■■■■□ 3.11
USP42-204ENST00000451154 CA12O43570 354 aa34.48■■■■□ 3.11
USP42-204ENST00000451154 ZNF157P51786 506 aaPredicted RBP34.48■■■■□ 3.11
USP42-204ENST00000451154 CHMP3Q9Y3E7 222 aa34.48■■■■□ 3.11
USP42-204ENST00000451154 KCNJ4P48050 445 aa34.47■■■■□ 3.11
USP42-204ENST00000451154 NBPF9Q3BBW0 867 aa34.47■■■■□ 3.11
USP42-204ENST00000451154 TTLL5Q6EMB2 1281 aa34.47■■■■□ 3.11
USP42-204ENST00000451154 SNAP23O00161 211 aa34.46■■■■□ 3.11
USP42-204ENST00000451154 IFIT5Q13325 482 aaKnown RBP34.46■■■■□ 3.11
USP42-204ENST00000451154 HELBQ8NG08 1087 aaPredicted RBP34.46■■■■□ 3.11
USP42-204ENST00000451154 CCDC102AQ96A19 550 aa34.46■■■■□ 3.11
USP42-204ENST00000451154 TAF5LO75529 589 aa34.45■■■■□ 3.11
USP42-204ENST00000451154 OGFOD1Q8N543 542 aa34.45■■■■□ 3.11
USP42-204ENST00000451154 CASP8AP2Q9UKL3 1982 aa34.45■■■■□ 3.11
USP42-204ENST00000451154 EPHA10Q5JZY3 1008 aa34.44■■■■□ 3.1
USP42-204ENST00000451154 LMBR1LQ6UX01 489 aa34.44■■■■□ 3.1
USP42-204ENST00000451154 ABHD8Q96I13 439 aa34.44■■■■□ 3.1
USP42-204ENST00000451154 PITPNM2Q9BZ72 1349 aa34.43■■■■□ 3.1
USP42-204ENST00000451154 ZNF646O15015 1829 aaPredicted RBP34.42■■■■□ 3.1
USP42-204ENST00000451154 MYO3BQ8WXR4 1341 aa34.42■■■■□ 3.1
USP42-204ENST00000451154 GRM8O00222 908 aa34.42■■■■□ 3.1
USP42-204ENST00000451154 GTF2IP78347 998 aa34.42■■■■□ 3.1
USP42-204ENST00000451154 KIF23Q02241 960 aaPredicted RBP34.42■■■■□ 3.1
USP42-204ENST00000451154 PRAMEF18Q5VWM3 479 aa34.42■■■■□ 3.1
USP42-204ENST00000451154 SLC4A10Q6U841 1118 aa34.42■■■■□ 3.1
USP42-204ENST00000451154 CD209Q9NNX6 404 aa34.41■■■■□ 3.1
USP42-204ENST00000451154 C9orf78Q9NZ63 289 aaPredicted RBP34.41■■■■□ 3.1
USP42-204ENST00000451154 WNT10BO00744 389 aa34.4■■■■□ 3.1
USP42-204ENST00000451154 ZNF594Q96JF6 807 aaPredicted RBP34.4■■■■□ 3.1
USP42-204ENST00000451154 KIAA0825Q8IV33 1275 aa34.39■■■■□ 3.1
USP42-204ENST00000451154 ZNF521Q96K83 1311 aa34.38■■■■□ 3.09
USP42-204ENST00000451154 CCDC57Q2TAC2 916 aa34.38■■■■□ 3.09
USP42-204ENST00000451154 MOB2Q70IA6 237 aa34.38■■■■□ 3.09
USP42-204ENST00000451154 IRS2Q9Y4H2 1338 aa34.37■■■■□ 3.09
USP42-204ENST00000451154 ALDH1L1O75891 902 aa34.37■■■■□ 3.09
USP42-204ENST00000451154 SASH1O94885 1247 aa34.37■■■■□ 3.09
USP42-204ENST00000451154 SLC10A3P09131 477 aa34.37■■■■□ 3.09
USP42-204ENST00000451154 SRCIN1Q9C0H9 1055 aa34.37■■■■□ 3.09
USP42-204ENST00000451154 PLIN1O60240 522 aa34.36■■■■□ 3.09
USP42-204ENST00000451154 TAF7LQ5H9L4 462 aa34.36■■■■□ 3.09
USP42-204ENST00000451154 FKBP1BP68106 108 aa34.35■■■■□ 3.09
USP42-204ENST00000451154 LDHAL6AQ6ZMR3 332 aa34.35■■■■□ 3.09
USP42-204ENST00000451154 C15orf52Q6ZUT6 534 aaKnown RBP34.35■■■■□ 3.09
USP42-204ENST00000451154 HDAC9Q9UKV0 1011 aa34.35■■■■□ 3.09
USP42-204ENST00000451154 MMP14P50281 582 aa34.34■■■■□ 3.09
USP42-204ENST00000451154 CSRNP1Q96S65 589 aa34.34■■■■□ 3.09
USP42-204ENST00000451154 UBE2Q2LH0YL09 131 aa34.33■■■■□ 3.09
USP42-204ENST00000451154 CNNM1Q9NRU3 951 aa34.33■■■■□ 3.09
USP42-204ENST00000451154 RASAL3Q86YV0 1011 aa34.32■■■■□ 3.08
USP42-204ENST00000451154 TRPA1O75762 1119 aa34.31■■■■□ 3.08
USP42-204ENST00000451154 CERS5Q8N5B7 392 aa34.31■■■■□ 3.08
USP42-204ENST00000451154 SUCLG2Q96I99 432 aa34.31■■■■□ 3.08
USP42-204ENST00000451154 RNF186Q9NXI6 227 aa34.31■■■■□ 3.08
USP42-204ENST00000451154 TTLL12Q14166 644 aaPredicted RBP34.3■■■■□ 3.08
USP42-204ENST00000451154 ZNF804AQ7Z570 1209 aa34.3■■■■□ 3.08
USP42-204ENST00000451154 MRPL50Q8N5N7 158 aaKnown RBP34.3■■■■□ 3.08
USP42-204ENST00000451154 KAZALD1Q96I82 304 aa34.3■■■■□ 3.08
USP42-204ENST00000451154 ZBED3Q96IU2 234 aaPredicted RBP34.3■■■■□ 3.08
USP42-204ENST00000451154 A0A1B0GUL6 1792 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 PAPPA2Q9BXP8 1791 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 CCDC85CA6NKD9 419 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 NBPF7P0C2Y1 421 aaPredicted RBP34.29■■■■□ 3.08
USP42-204ENST00000451154 IL1R1P14778 569 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 MCOLN1Q9GZU1 580 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 AKAP11Q9UKA4 1901 aa34.29■■■■□ 3.08
USP42-204ENST00000451154 SAGE1Q9NXZ1 904 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms