RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TMC6Q7Z403 805 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MFN1Q8IWA4 741 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 NME8Q8N427 588 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 C3orf20Q8ND61 904 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ZCRB1Q8TBF4 217 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 THUMPD2Q9BTF0 503 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 LNPKQ9C0E8 428 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PANK3Q9H999 370 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 FRMD4BQ9Y2L6 1034 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 PPRC1Q5VV67 1664 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 ASXL1Q8IXJ9 1541 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 NDC80O14777 642 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CIB2O75838 187 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MAP4K4O95819 1239 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 PTGS1P23219 599 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 KCNJ6P48051 423 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 KRT83P78385 493 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TYRO3Q06418 890 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SPAG1Q07617 926 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CFAP100Q494V2 611 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SPECC1Q5M775 1068 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MIER3Q7Z3K6 550 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 IQUBQ8NA54 791 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PANK1Q8TE04 598 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 FBXO41Q8TF61 875 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 C17orf50Q8WW18 174 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TSC1Q92574 1164 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 STMN2Q93045 179 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 RILPL2Q969X0 211 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CEP63Q96MT8 703 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CAPS2Q9BXY5 557 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ANTXR1Q9H6X2 564 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PHAXQ9H814 394 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 MYO1AQ9UBC5 1043 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CFDP1Q9UEE9 299 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 SCOCQ9UIL1 159 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MTUS1Q9ULD2 1270 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 IGF1RP08069 1367 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 KIF24Q5T7B8 1368 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CFAP73A6NFT4 308 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 RASSF10A6NK89 507 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 STX6O43752 255 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 U2AF1L5P0DN76 240 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 TRIM21P19474 475 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 ZNF131P52739 623 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 U2AF1Q01081 240 aaKnown RBP eCLIP2.5□□□□□ -2.01
USP53-202ENST00000450251 NCBP1Q09161 790 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 INAQ16352 499 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MAP7D1Q3KQU3 841 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 AMOTQ4VCS5 1084 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CERS3Q8IU89 383 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 NEK11Q8NG66 645 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PPP1R14BQ96C90 147 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 LRRC45Q96CN5 670 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CCDC51Q96ER9 411 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 CALR3Q96L12 384 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 CARD10Q9BWT7 1032 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TMX1Q9H3N1 280 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SEPT11Q9NVA2 429 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 TFIP11Q9UBB9 837 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 RASAL2Q9UJF2 1139 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 GOLGA6BA6NDN3 693 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TMEM232C9JQI7 657 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 LIN7AO14910 233 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 RGL2O15211 777 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SOX12O15370 315 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 HCLS1P14317 486 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 CORO7P57737 925 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PSME1Q06323 249 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TRPC3Q13507 836 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ATP2B3Q16720 1220 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TMEM132AQ24JP5 1023 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MAP3K21Q5TCX8 1036 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 LARP1BQ659C4 914 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 PHLDB3Q6NSJ2 640 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ZSCAN25Q6NSZ9 544 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SLC30A9Q6PML9 568 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ATF7IPQ6VMQ6 1270 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PIP4K2CQ8TBX8 421 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 MICAL1Q8TDZ2 1067 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 WASF1Q92558 559 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ZNF653Q96CK0 615 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 RRP36Q96EU6 259 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 NAPGQ99747 312 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 TTC12Q9H892 705 aaPredicted RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 PDRG1Q9NUG6 133 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 LMBRD1Q9NUN5 540 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 RIPOR2Q9Y4F9 1068 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SPDYE2BA6NHP3 402 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 TULP2O00295 520 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP6O43182 974 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 GMNNO75496 209 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 RNF8O76064 485 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 FGFR1OPO95684 399 aaKnown RBP2.5□□□□□ -2.01
USP53-202ENST00000450251 GNAI3P08754 354 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 SPDYE6P0CI01 402 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 PPP2R1AP30153 589 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ALDH3A1P30838 453 aa2.5□□□□□ -2.01
USP53-202ENST00000450251 ABCD1P33897 745 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms