RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
RFX3-208ENST00000449234 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
RFX3-208ENST00000449234 CSF1RP07333 972 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 TYRO3Q06418 890 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 HSP90AB3PQ58FF7 597 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 ZSCAN25Q6NSZ9 544 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
RFX3-208ENST00000449234 BRF1Q92994 677 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
RFX3-208ENST00000449234 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 CDHR2Q9BYE9 1310 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
RFX3-208ENST00000449234 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
RFX3-208ENST00000449234 FGD1P98174 961 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
RFX3-208ENST00000449234 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
RFX3-208ENST00000449234 A0A1B0GUL7 405 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 E7EWF7 191 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 GOLIM4O00461 696 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 LIG1P18858 919 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 CDC25BP30305 580 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 SCRN1Q12765 414 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
RFX3-208ENST00000449234 NSUN7Q8NE18 718 aaKnown RBP13.49□□□□□ -0.25
RFX3-208ENST00000449234 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
RFX3-208ENST00000449234 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
RFX3-208ENST00000449234 GTF2F1P35269 517 aaKnown RBP eCLIP13.48□□□□□ -0.25
RFX3-208ENST00000449234 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
RFX3-208ENST00000449234 TIMM10P62072 90 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 DHX8Q14562 1220 aaKnown RBP13.48□□□□□ -0.25
RFX3-208ENST00000449234 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 MYRIPQ8NFW9 859 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 UBE2Q2Q8WVN8 375 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 SEC62Q99442 399 aaKnown RBP13.48□□□□□ -0.25
RFX3-208ENST00000449234 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
RFX3-208ENST00000449234 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
RFX3-208ENST00000449234 SALL1Q9NSC2 1324 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 NEMFO60524 1076 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 A1BGP04217 495 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 PDIA3P30101 505 aaKnown RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 STK3Q13188 491 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 IMMTQ16891 758 aaKnown RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 SARM1Q6SZW1 724 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
RFX3-208ENST00000449234 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 AK7Q96M32 723 aa13.47□□□□□ -0.25
RFX3-208ENST00000449234 MAST3O60307 1309 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 STRCP1A6NGW2 1772 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 UQCRHLA0A096LP55 91 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 JAK2O60674 1132 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 STARD3NLO95772 234 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 UQCRHP07919 91 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 GORABQ5T7V8 394 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 BICD2Q8TD16 824 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 APPBP2Q92624 585 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
RFX3-208ENST00000449234 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 RTEL1Q9NZ71 1219 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 TJP1Q07157 1748 aa13.46□□□□□ -0.25
RFX3-208ENST00000449234 COL5A2P05997 1499 aaPredicted RBP13.46□□□□□ -0.25
RFX3-208ENST00000449234 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 IFIT5Q13325 482 aaKnown RBP13.45□□□□□ -0.26
RFX3-208ENST00000449234 LRRC24Q50LG9 513 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
RFX3-208ENST00000449234 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 BRAPQ7Z569 592 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 PLA2G4DQ86XP0 818 aa13.45□□□□□ -0.26
RFX3-208ENST00000449234 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
RFX3-208ENST00000449234 YEATS4O95619 227 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
RFX3-208ENST00000449234 ZNF165P49910 485 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 ALX1Q15699 326 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 ADALQ6DHV7 355 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
RFX3-208ENST00000449234 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms