RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 HLFQ16534 295 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 TNNI3KQ59H18 835 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 C6orf132Q5T0Z8 1188 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 ATG9AQ7Z3C6 839 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 ANP32EQ9BTT0 268 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 SNRKQ9NRH2 765 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 FPGT-TNNI3KV9GXZ4 949 aa8.41□□□□□ -1.06
RFC4-209ENST00000448497 ZNF609O15014 1411 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 TRIM6-TRIM34B2RNG4 842 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 SGSM2O43147 1006 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 PDE8AO60658 829 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
RFC4-209ENST00000448497 MEX3CQ5U5Q3 659 aaKnown RBP8.4□□□□□ -1.06
RFC4-209ENST00000448497 TSHZ3Q63HK5 1081 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.4□□□□□ -1.06
RFC4-209ENST00000448497 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
RFC4-209ENST00000448497 MYH7P12883 1935 aa8.4□□□□□ -1.06
RFC4-209ENST00000448497 C4AP0C0L4 1744 aa8.4□□□□□ -1.07
RFC4-209ENST00000448497 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
RFC4-209ENST00000448497 UBN2Q6ZU65 1347 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 RAD50Q92878 1312 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 CTSWP56202 376 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 TFCP2Q12800 502 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 JARID2Q92833 1246 aaPredicted RBP8.39□□□□□ -1.07
RFC4-209ENST00000448497 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 FAM89AQ96GI7 184 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 SIL1Q9H173 461 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
RFC4-209ENST00000448497 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 A0A1B0GUL6 1792 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
RFC4-209ENST00000448497 UBR3Q6ZT12 1888 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 IRS4O14654 1257 aaPredicted RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 MCCP23508 829 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 PTGDRQ13258 359 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 HIC1Q14526 733 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 LINC00116Q8NCU8 138 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 HAUS7Q99871 368 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 CCDC8Q9H0W5 538 aaPredicted RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 ANTXR1Q9H6X2 564 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 CEP126Q9P2H0 1117 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
RFC4-209ENST00000448497 ZNF330Q9Y3S2 320 aaPredicted RBP8.38□□□□□ -1.07
RFC4-209ENST00000448497 ARHGAP33O14559 1287 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 KCNB2Q92953 911 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 ZNF512BQ96KM6 892 aaPredicted RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 UTP14AQ9BVJ6 771 aaKnown RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 RBM27Q9P2N5 1060 aaKnown RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 RGPD3A6NKT7 1758 aaPredicted RBP8.37□□□□□ -1.07
RFC4-209ENST00000448497 RGPD4Q7Z3J3 1758 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
RFC4-209ENST00000448497 ANKRD18BA2A2Z9 1011 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 NTSR2O95665 410 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 GPTP24298 496 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 HSPA4P34932 840 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 MCM2P49736 904 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 SUSD4Q5VX71 490 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 LSG1Q9H089 658 aaKnown RBP8.36□□□□□ -1.07
RFC4-209ENST00000448497 DIAPH3Q9NSV4 1193 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 NARFQ9UHQ1 456 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 DOCK2Q92608 1830 aa8.36□□□□□ -1.07
RFC4-209ENST00000448497 MED23Q9ULK4 1368 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 A0A0G2JS52 829 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
RFC4-209ENST00000448497 GNPATO15228 680 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 GPR37O15354 613 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 ITGA6P23229 1130 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 DDIT3P35638 169 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 MYT1Q01538 1121 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 LRRC24Q50LG9 513 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
RFC4-209ENST00000448497 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms