RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NME9Q86XW9 330 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 SUFUQ9UMX1 484 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 FRMPD1Q5SYB0 1578 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 SERPINC1P01008 464 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 MAP4K1Q92918 833 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 ARHGAP6O43182 974 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 UBASH3AP57075 661 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 CHMP4BP1P59074 171 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 CCDC12Q8WUD4 166 aaPredicted RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 HNRNPLLQ8WVV9 542 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 BPIFA3Q9BQP9 254 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 CFAP100Q494V2 611 aa10.87□□□□□ -0.67
SYNPO2-204ENST00000448416 TOP1P11387 765 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 FAM71BQ8TC56 605 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 MRPS27Q92552 414 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 ERLIN2O94905 339 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 ATP1A3P13637 1013 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 PUF60Q9UHX1 559 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 POTEB2H3BUK9 544 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 CBFA2T2O43439 604 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 KIF1CO43896 1103 aaKnown RBP10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 GGT6Q6P531 493 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 ABCB6Q9NP58 842 aa10.86□□□□□ -0.67
SYNPO2-204ENST00000448416 TDO2P48775 406 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 CLASRPQ8N2M8 674 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 COG3Q96JB2 828 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 SIL1Q9H173 461 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 FAM204AQ9H8W3 233 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 KCNG1Q9UIX4 513 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 USP8P40818 1118 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 SRGAP1Q7Z6B7 1085 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 FMR1NBQ8N0W7 255 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ECHDC1Q9NTX5 307 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ARHGEF10O15013 1369 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ATP7BP35670 1465 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 CHD2O14647 1828 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 SLC3A2P08195 630 aaKnown RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 POLA2Q14181 598 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 NCAPHQ15003 741 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 GPATCH3Q96I76 525 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
SYNPO2-204ENST00000448416 NPATQ14207 1427 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 LIG3P49916 1009 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 NLRP12P59046 1061 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 NMIQ13287 307 aaPredicted RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 PDILTQ8N807 584 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 MED4Q9NPJ6 270 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 SETD1AO15047 1707 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 CASP8Q14790 479 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 KARSQ15046 597 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 SF3A1Q15459 793 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 PTPN21Q16825 1174 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 DPF2Q92785 391 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 BAG1Q99933 345 aaPredicted RBP10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 PCDHA7Q9UN72 937 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 USP5P45974 858 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 NDUFA8P51970 172 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 PNKPQ96T60 521 aa10.84□□□□□ -0.67
SYNPO2-204ENST00000448416 CUTAO60888 179 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 CARD10Q9BWT7 1032 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 HIP1O00291 1037 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 ATL3Q6DD88 541 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 NAA16Q6N069 864 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 CEP112Q8N8E3 955 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 GBP3Q9H0R5 595 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 RHOXF2BP0C7M4 288 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 HNRNPH1P31943 449 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 VSTM4Q8IW00 320 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
SYNPO2-204ENST00000448416 FAM212AQ96EL1 285 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms