RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PLA2G12BQ9BX93 195 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 IGHMBP2P38935 993 aaKnown RBP36.12■■■■□ 3.37
CBX4-202ENST00000448310 SULF1Q8IWU6 871 aa36.12■■■■□ 3.37
CBX4-202ENST00000448310 LINS1Q8NG48 757 aa36.12■■■■□ 3.37
CBX4-202ENST00000448310 MYH16Q9H6N6 1097 aa36.12■■■■□ 3.37
CBX4-202ENST00000448310 SPINK5Q9NQ38 1064 aaPredicted RBP36.12■■■■□ 3.37
CBX4-202ENST00000448310 ITGA6P23229 1130 aa36.11■■■■□ 3.37
CBX4-202ENST00000448310 SCARF1Q14162 830 aa36.11■■■■□ 3.37
CBX4-202ENST00000448310 USP17L8P0C7I0 530 aa36.1■■■■□ 3.37
CBX4-202ENST00000448310 BRPF1P55201 1214 aaPredicted RBP36.1■■■■□ 3.37
CBX4-202ENST00000448310 ANGEL2Q5VTE6 544 aaKnown RBP36.1■■■■□ 3.37
CBX4-202ENST00000448310 C2orf69Q8N8R5 385 aa36.1■■■■□ 3.37
CBX4-202ENST00000448310 TXNRD3Q86VQ6 643 aa36.09■■■■□ 3.37
CBX4-202ENST00000448310 MXD3Q9BW11 206 aa36.09■■■■□ 3.37
CBX4-202ENST00000448310 MYOZ2Q9NPC6 264 aa36.09■■■■□ 3.37
CBX4-202ENST00000448310 FBXW7Q969H0 707 aa36.08■■■■□ 3.37
CBX4-202ENST00000448310 CDCA5Q96FF9 252 aa36.08■■■■□ 3.37
CBX4-202ENST00000448310 CASP8AP2Q9UKL3 1982 aa36.07■■■■□ 3.37
CBX4-202ENST00000448310 F6X3S4 739 aa36.07■■■■□ 3.36
CBX4-202ENST00000448310 CSF1RP07333 972 aa36.07■■■■□ 3.36
CBX4-202ENST00000448310 NOGQ13253 232 aa36.07■■■■□ 3.36
CBX4-202ENST00000448310 RGMBQ6NW40 437 aa36.07■■■■□ 3.36
CBX4-202ENST00000448310 KLRK1P26718 216 aa36.06■■■■□ 3.36
CBX4-202ENST00000448310 FAM9BQ8IZU0 186 aa36.06■■■■□ 3.36
CBX4-202ENST00000448310 MPHOSPH8Q99549 860 aa36.06■■■■□ 3.36
CBX4-202ENST00000448310 LEMD3Q9Y2U8 911 aa36.06■■■■□ 3.36
CBX4-202ENST00000448310 DACT2Q5SW24 774 aa36.05■■■■□ 3.36
CBX4-202ENST00000448310 SCAF8Q9UPN6 1271 aaKnown RBP36.05■■■■□ 3.36
CBX4-202ENST00000448310 FAM155AB1AL88 458 aaPredicted RBP36.04■■■■□ 3.36
CBX4-202ENST00000448310 ABHD8Q96I13 439 aa36.04■■■■□ 3.36
CBX4-202ENST00000448310 COA1Q9GZY4 146 aa36.04■■■■□ 3.36
CBX4-202ENST00000448310 ZNF804BA4D1E1 1349 aa36.04■■■■□ 3.36
CBX4-202ENST00000448310 CA12O43570 354 aa36.03■■■■□ 3.36
CBX4-202ENST00000448310 ANKRD2Q9GZV1 360 aa36.03■■■■□ 3.36
CBX4-202ENST00000448310 A0A1B0GUL6 1792 aa36.02■■■■□ 3.36
CBX4-202ENST00000448310 ZNF157P51786 506 aaPredicted RBP36.01■■■■□ 3.36
CBX4-202ENST00000448310 ANKRD18BA2A2Z9 1011 aa36■■■■□ 3.35
CBX4-202ENST00000448310 CHRNDQ07001 517 aa36■■■■□ 3.35
CBX4-202ENST00000448310 BEND3Q5T5X7 828 aa36■■■■□ 3.35
CBX4-202ENST00000448310 FOXO4P98177 505 aa35.99■■■■□ 3.35
CBX4-202ENST00000448310 NBPF9Q3BBW0 867 aa35.99■■■■□ 3.35
CBX4-202ENST00000448310 STRIP1Q5VSL9 837 aa35.99■■■■□ 3.35
CBX4-202ENST00000448310 KCNJ4P48050 445 aa35.98■■■■□ 3.35
CBX4-202ENST00000448310 CCDC102AQ96A19 550 aa35.98■■■■□ 3.35
CBX4-202ENST00000448310 CHMP3Q9Y3E7 222 aa35.98■■■■□ 3.35
CBX4-202ENST00000448310 PITPNM2Q9BZ72 1349 aa35.98■■■■□ 3.35
CBX4-202ENST00000448310 SNAP23O00161 211 aa35.97■■■■□ 3.35
CBX4-202ENST00000448310 KIF23Q02241 960 aaPredicted RBP35.96■■■■□ 3.35
CBX4-202ENST00000448310 MYO3BQ8WXR4 1341 aa35.96■■■■□ 3.35
CBX4-202ENST00000448310 PAPPA2Q9BXP8 1791 aa35.95■■■■□ 3.35
CBX4-202ENST00000448310 TAF5LO75529 589 aa35.95■■■■□ 3.35
CBX4-202ENST00000448310 TTLL5Q6EMB2 1281 aa35.95■■■■□ 3.35
CBX4-202ENST00000448310 OGFOD1Q8N543 542 aa35.95■■■■□ 3.35
CBX4-202ENST00000448310 HELBQ8NG08 1087 aaPredicted RBP35.95■■■■□ 3.35
CBX4-202ENST00000448310 AKAP11Q9UKA4 1901 aa35.95■■■■□ 3.34
CBX4-202ENST00000448310 SLC10A3P09131 477 aa35.94■■■■□ 3.34
CBX4-202ENST00000448310 IFIT5Q13325 482 aaKnown RBP35.94■■■■□ 3.34
CBX4-202ENST00000448310 EPHA10Q5JZY3 1008 aa35.94■■■■□ 3.34
CBX4-202ENST00000448310 PRAMEF18Q5VWM3 479 aa35.94■■■■□ 3.34
CBX4-202ENST00000448310 GTF2IP78347 998 aa35.93■■■■□ 3.34
CBX4-202ENST00000448310 WNT10BO00744 389 aa35.92■■■■□ 3.34
CBX4-202ENST00000448310 SASH1O94885 1247 aa35.92■■■■□ 3.34
CBX4-202ENST00000448310 LMBR1LQ6UX01 489 aa35.92■■■■□ 3.34
CBX4-202ENST00000448310 MOB2Q70IA6 237 aa35.92■■■■□ 3.34
CBX4-202ENST00000448310 KIAA0825Q8IV33 1275 aa35.92■■■■□ 3.34
CBX4-202ENST00000448310 IRS2Q9Y4H2 1338 aa35.9■■■■□ 3.34
CBX4-202ENST00000448310 GRM8O00222 908 aa35.9■■■■□ 3.34
CBX4-202ENST00000448310 ZNF594Q96JF6 807 aaPredicted RBP35.9■■■■□ 3.34
CBX4-202ENST00000448310 CD209Q9NNX6 404 aa35.9■■■■□ 3.34
CBX4-202ENST00000448310 SLC4A10Q6U841 1118 aa35.89■■■■□ 3.34
CBX4-202ENST00000448310 RASAL3Q86YV0 1011 aa35.89■■■■□ 3.34
CBX4-202ENST00000448310 FKBP1BP68106 108 aa35.88■■■■□ 3.33
CBX4-202ENST00000448310 C9orf78Q9NZ63 289 aaPredicted RBP35.87■■■■□ 3.33
CBX4-202ENST00000448310 CCDC85CA6NKD9 419 aa35.86■■■■□ 3.33
CBX4-202ENST00000448310 CSRNP1Q96S65 589 aa35.86■■■■□ 3.33
CBX4-202ENST00000448310 MCOLN1Q9GZU1 580 aa35.86■■■■□ 3.33
CBX4-202ENST00000448310 UBE2Q2LH0YL09 131 aa35.85■■■■□ 3.33
CBX4-202ENST00000448310 CCDC57Q2TAC2 916 aa35.85■■■■□ 3.33
CBX4-202ENST00000448310 RNF186Q9NXI6 227 aa35.85■■■■□ 3.33
CBX4-202ENST00000448310 HDAC9Q9UKV0 1011 aa35.85■■■■□ 3.33
CBX4-202ENST00000448310 PLIN1O60240 522 aa35.84■■■■□ 3.33
CBX4-202ENST00000448310 TRPA1O75762 1119 aa35.84■■■■□ 3.33
CBX4-202ENST00000448310 TAF7LQ5H9L4 462 aa35.84■■■■□ 3.33
CBX4-202ENST00000448310 C15orf52Q6ZUT6 534 aaKnown RBP35.84■■■■□ 3.33
CBX4-202ENST00000448310 SAGE1Q9NXZ1 904 aa35.84■■■■□ 3.33
CBX4-202ENST00000448310 ZNF521Q96K83 1311 aa35.83■■■■□ 3.33
CBX4-202ENST00000448310 ALDH1L1O75891 902 aa35.83■■■■□ 3.33
CBX4-202ENST00000448310 TTLL12Q14166 644 aaPredicted RBP35.83■■■■□ 3.33
CBX4-202ENST00000448310 CERS5Q8N5B7 392 aa35.83■■■■□ 3.33
CBX4-202ENST00000448310 SRCIN1Q9C0H9 1055 aa35.83■■■■□ 3.33
CBX4-202ENST00000448310 DGKZQ13574 1117 aa35.82■■■■□ 3.32
CBX4-202ENST00000448310 LDHAL6AQ6ZMR3 332 aa35.82■■■■□ 3.32
CBX4-202ENST00000448310 MMP14P50281 582 aa35.81■■■■□ 3.32
CBX4-202ENST00000448310 ZBED3Q96IU2 234 aaPredicted RBP35.81■■■■□ 3.32
CBX4-202ENST00000448310 CNNM1Q9NRU3 951 aa35.81■■■■□ 3.32
CBX4-202ENST00000448310 ZNF804AQ7Z570 1209 aa35.8■■■■□ 3.32
CBX4-202ENST00000448310 SUCLG2Q96I99 432 aa35.8■■■■□ 3.32
CBX4-202ENST00000448310 JAG2Q9Y219 1238 aa35.8■■■■□ 3.32
CBX4-202ENST00000448310 ECM29Q5VYK3 1845 aa35.79■■■■□ 3.32
CBX4-202ENST00000448310 F8W031 263 aaPredicted RBP35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms