RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 EPC1Q9H2F5 836 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 ARHGAP23Q9P227 1491 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 POLR3GO15318 223 aaPredicted RBP23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 PLA2G4AP47712 749 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 GOLGA8FQ08AF8 430 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 GOLGA8DPQ0D2H9 430 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 CCDC93Q567U6 631 aa23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 FMR1NBQ8N0W7 255 aaPredicted RBP23.86■■□□□ 1.41
SMARCD2-203ENST00000448276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.86■■□□□ 1.419e-7■□□□□ 10.1
SMARCD2-203ENST00000448276 PNMA6AP0CW24 399 aaPredicted RBP23.85■■□□□ 1.41
SMARCD2-203ENST00000448276 TFCP2Q12800 502 aa23.85■■□□□ 1.41
SMARCD2-203ENST00000448276 NAA16Q6N069 864 aaPredicted RBP23.85■■□□□ 1.41
SMARCD2-203ENST00000448276 DNAI1Q9UI46 699 aa23.85■■□□□ 1.41
SMARCD2-203ENST00000448276 SEC31AO94979 1220 aaKnown RBP23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 SFPQP23246 707 aaKnown RBP eCLIP23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 NAT10Q9H0A0 1025 aaKnown RBP23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 TAOK2Q9UL54 1235 aa23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 POLR3DP05423 398 aaPredicted RBP23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 ZNF396Q96N95 335 aaPredicted RBP23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 CLIC4Q9Y696 253 aa23.84■■□□□ 1.41
SMARCD2-203ENST00000448276 MYL6BP14649 208 aa23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 MRPS27Q92552 414 aaKnown RBP23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 U3KPZ7 1027 aaPredicted RBP23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 FANCGO15287 622 aa23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 LMOD1P29536 600 aaPredicted RBP23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 DBNDD2Q9BQY9 259 aa23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 KCND1Q9NSA2 647 aa23.83■■□□□ 1.41
SMARCD2-203ENST00000448276 GPHNQ9NQX3 736 aaPredicted RBP23.83■■□□□ 1.4
SMARCD2-203ENST00000448276 GJB4Q9NTQ9 266 aa23.83■■□□□ 1.4
SMARCD2-203ENST00000448276 KIF2AO00139 706 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 ATP1A3P13637 1013 aa23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 HNRNPH2P55795 449 aaKnown RBP23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 RIC3Q7Z5B4 369 aa23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 KIAA1468Q9P260 1216 aa23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 ZRSR1Q15695 479 aaKnown RBP23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 MCMDC2Q4G0Z9 681 aa23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 FAM177A1Q8N128 213 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 TMX1Q9H3N1 280 aa23.82■■□□□ 1.4
SMARCD2-203ENST00000448276 DIP2AQ14689 1571 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 CAPN2P17655 700 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 CDK11BP21127 795 aaKnown RBP23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 CYP2C19P33261 490 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 PIP4K2AP48426 406 aaPredicted RBP23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 DHX32Q7L7V1 743 aaKnown RBP23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 RAB11FIP4Q86YS3 637 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 IMPACTQ9P2X3 320 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 TNNI3KQ59H18 835 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 LLPHQ9BRT6 129 aaKnown RBP23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 FPGT-TNNI3KV9GXZ4 949 aa23.81■■□□□ 1.4
SMARCD2-203ENST00000448276 RNMTO43148 476 aaKnown RBP23.8■■□□□ 1.4
SMARCD2-203ENST00000448276 ATP5JP18859 108 aa23.8■■□□□ 1.4
SMARCD2-203ENST00000448276 SF3A1Q15459 793 aaKnown RBP23.8■■□□□ 1.4
SMARCD2-203ENST00000448276 NEK11Q8NG66 645 aa23.8■■□□□ 1.4
SMARCD2-203ENST00000448276 ZCCHC17Q9NP64 241 aaKnown RBP23.8■■□□□ 1.4
SMARCD2-203ENST00000448276 AKAP4Q5JQC9 854 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 CCDC150Q8NCX0 1101 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 ZBTB9Q96C00 473 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 FDPSP14324 419 aaKnown RBP23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 DPF2Q92785 391 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 MYD88Q99836 296 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 CALCOCO1Q9P1Z2 691 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 ORC3Q9UBD5 711 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 NEDD4P46934 1319 aa23.79■■□□□ 1.4
SMARCD2-203ENST00000448276 PSDA5PKW4 1024 aaPredicted RBP23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 URI1O94763 535 aaPredicted RBP23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 UBXN4Q92575 508 aa23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 PDIA3P30101 505 aaKnown RBP23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 NCAPHQ15003 741 aa23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 STK38Q15208 465 aa23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 CARD6Q9BX69 1037 aa23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 UTYO14607 1347 aa23.78■■□□□ 1.4
SMARCD2-203ENST00000448276 PDIA6Q15084 440 aa23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 ADALQ6DHV7 355 aa23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 ETF1P62495 437 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 SLC39A6Q13433 755 aa23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 CHMP4AQ9BY43 222 aa23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
SMARCD2-203ENST00000448276 NEURL1BA8MQ27 555 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 FANCCQ00597 558 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 LINC00301Q8NCQ3 95 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 IP6K1Q92551 441 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 ZRANB2O95218 330 aaKnown RBP eCLIP23.76■■□□□ 1.395e-8■■■■■ 77
SMARCD2-203ENST00000448276 SLC3A2P08195 630 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 ST5P78524 1137 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 EXOSC10Q01780 885 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 TTLL5Q6EMB2 1281 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 TMCO3Q6UWJ1 677 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 UTP14AQ9BVJ6 771 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 CARMIL3Q8ND23 1372 aa23.76■■□□□ 1.39
SMARCD2-203ENST00000448276 TRIM65Q6PJ69 517 aa23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 MNS1Q8NEH6 495 aa23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 SALL1Q9NSC2 1324 aa23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 E7EWF7 191 aa23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 GOLIM4O00461 696 aa23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 DDX58O95786 925 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-203ENST00000448276 PTPN12Q05209 780 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms