RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 ERBINQ96RT1 1412 aa8.89□□□□□ -0.99
USP49-205ENST00000448078 ANKRD30AQ9BXX3 1397 aa8.89□□□□□ -0.99
USP49-205ENST00000448078 EPB42P16452 691 aa8.89□□□□□ -0.99
USP49-205ENST00000448078 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
USP49-205ENST00000448078 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
USP49-205ENST00000448078 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
USP49-205ENST00000448078 EIF2AK4Q9P2K8 1649 aaKnown RBP8.89□□□□□ -0.99
USP49-205ENST00000448078 TET3O43151 1660 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 LRP6O75581 1613 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 MARSP56192 900 aaKnown RBP8.88□□□□□ -0.99
USP49-205ENST00000448078 SAMD5Q5TGI4 173 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 PNMA5Q96PV4 448 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 MAP3K1Q13233 1512 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 RIMS2Q9UQ26 1411 aa8.88□□□□□ -0.99
USP49-205ENST00000448078 XIRP1Q702N8 1843 aaKnown RBP8.87□□□□□ -0.99
USP49-205ENST00000448078 PTCD1O75127 700 aaKnown RBP8.87□□□□□ -0.99
USP49-205ENST00000448078 TBC1D8BQ0IIM8 1120 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 UBAP2LQ14157 1087 aaKnown RBP8.87□□□□□ -0.99
USP49-205ENST00000448078 C11orf91Q3C1V1 193 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 BTLAQ7Z6A9 289 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 GDF2Q9UK05 429 aaPredicted RBP8.87□□□□□ -0.99
USP49-205ENST00000448078 SETD5Q9C0A6 1442 aa8.87□□□□□ -0.99
USP49-205ENST00000448078 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 BCRP11274 1271 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 SFSWAPQ12872 951 aaKnown RBP8.86□□□□□ -0.99
USP49-205ENST00000448078 LAMC2Q13753 1193 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
USP49-205ENST00000448078 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 LYPD4Q6UWN0 246 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 NDFIP2Q9NV92 336 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 DNMT3AQ9Y6K1 912 aaPredicted RBP8.86□□□□□ -0.99
USP49-205ENST00000448078 MAST1Q9Y2H9 1570 aa8.86□□□□□ -0.99
USP49-205ENST00000448078 PIK3C2BO00750 1634 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 COL16A1Q07092 1604 aaPredicted RBP8.85□□□□□ -0.99
USP49-205ENST00000448078 NEURL1BA8MQ27 555 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 CELA2BP08218 269 aaPredicted RBP8.85□□□□□ -0.99
USP49-205ENST00000448078 PCBP4P57723 403 aaKnown RBP8.85□□□□□ -0.99
USP49-205ENST00000448078 OCLNQ16625 522 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 GALNT6Q8NCL4 622 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 ACDQ96AP0 544 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 IFT43Q96FT9 208 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 IGFLR1Q9H665 355 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 MTMR7Q9Y216 660 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 RGS12O14924 1447 aa8.85□□□□□ -0.99
USP49-205ENST00000448078 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
USP49-205ENST00000448078 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
USP49-205ENST00000448078 ADH6P28332 368 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 IDH3AP50213 366 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 TYRO3Q06418 890 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
USP49-205ENST00000448078 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 PODNQ7Z5L7 613 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
USP49-205ENST00000448078 STRN4Q9NRL3 753 aa8.84□□□□□ -0.99
USP49-205ENST00000448078 NWD1Q149M9 1564 aa8.83□□□□□ -1
USP49-205ENST00000448078 NOS1P29475 1434 aa8.83□□□□□ -1
USP49-205ENST00000448078 DCCP43146 1447 aa8.83□□□□□ -1
USP49-205ENST00000448078 CARNS1A5YM72 827 aa8.83□□□□□ -1
USP49-205ENST00000448078 BRD2P25440 801 aaKnown RBP8.83□□□□□ -1
USP49-205ENST00000448078 PDE4CQ08493 712 aa8.83□□□□□ -1
USP49-205ENST00000448078 SPEM2Q0P670 501 aa8.83□□□□□ -1
USP49-205ENST00000448078 BHMTQ93088 406 aa8.83□□□□□ -1
USP49-205ENST00000448078 SHPRHQ149N8 1683 aa8.83□□□□□ -1
USP49-205ENST00000448078 C2CD2LO14523 706 aa8.82□□□□□ -1
USP49-205ENST00000448078 MICAL2O94851 1124 aa8.82□□□□□ -1
USP49-205ENST00000448078 ARAFP10398 606 aa8.82□□□□□ -1
USP49-205ENST00000448078 ARSDP51689 593 aa8.82□□□□□ -1
USP49-205ENST00000448078 COX20Q5RI15 118 aa8.82□□□□□ -1
USP49-205ENST00000448078 FAM182BQ5T319 152 aa8.82□□□□□ -1
USP49-205ENST00000448078 SYT9Q86SS6 491 aa8.82□□□□□ -1
USP49-205ENST00000448078 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
USP49-205ENST00000448078 MROH1Q8NDA8 1641 aa8.82□□□□□ -1
USP49-205ENST00000448078 PNPLA6Q8IY17 1366 aa8.82□□□□□ -1
USP49-205ENST00000448078 CEP152O94986 1710 aa8.82□□□□□ -1
USP49-205ENST00000448078 ADGRB3O60242 1522 aa8.81□□□□□ -1
USP49-205ENST00000448078 EFSO43281 561 aa8.81□□□□□ -1
USP49-205ENST00000448078 ALAS2P22557 587 aa8.81□□□□□ -1
USP49-205ENST00000448078 BAG6P46379 1132 aa8.81□□□□□ -1
USP49-205ENST00000448078 AAMPQ13685 434 aa8.81□□□□□ -1
USP49-205ENST00000448078 IER5Q5VY09 327 aa8.81□□□□□ -1
USP49-205ENST00000448078 KRT25Q7Z3Z0 450 aa8.81□□□□□ -1
USP49-205ENST00000448078 TREML1Q86YW5 311 aa8.81□□□□□ -1
USP49-205ENST00000448078 C7orf43Q8WVR3 580 aa8.81□□□□□ -1
USP49-205ENST00000448078 MYO19Q96H55 970 aa8.81□□□□□ -1
USP49-205ENST00000448078 USTQ9Y2C2 406 aa8.81□□□□□ -1
USP49-205ENST00000448078 RPRD2Q5VT52 1461 aaKnown RBP8.81□□□□□ -1
USP49-205ENST00000448078 PTCH1Q13635 1447 aa8.8□□□□□ -1
USP49-205ENST00000448078 LMTK2Q8IWU2 1503 aa8.8□□□□□ -1
USP49-205ENST00000448078 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
USP49-205ENST00000448078 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
USP49-205ENST00000448078 RGL4Q8IZJ4 473 aa8.8□□□□□ -1
USP49-205ENST00000448078 CMTR1Q8N1G2 835 aaKnown RBP8.8□□□□□ -1
USP49-205ENST00000448078 TTC16Q8NEE8 873 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms