RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 LDHAL6AQ6ZMR3 332 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 CAPNS2Q96L46 248 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 CTCFP49711 727 aaPredicted RBP13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 MMP14P50281 582 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 FOXO4P98177 505 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 FMR1Q06787 632 aaKnown RBP eCLIP13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 STRIP1Q5VSL9 837 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 CST9Q5W186 159 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 MRPL50Q8N5N7 158 aaKnown RBP13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
NPIPB3-202ENST00000448012 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
NPIPB3-202ENST00000448012 COL4A1P02462 1669 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 PLIN1O60240 522 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 SCARF1Q14162 830 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 TTLL5Q6EMB2 1281 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 CYP4F22Q6NT55 531 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 HHIPL1Q96JK4 782 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 MYOZ2Q9NPC6 264 aa13.79□□□□□ -0.2
NPIPB3-202ENST00000448012 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 HUNKP57058 714 aa13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 COL13A1Q5TAT6 717 aaPredicted RBP13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 HDAC5Q9UQL6 1122 aa13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 ZNF609O15014 1411 aa13.78□□□□□ -0.2
NPIPB3-202ENST00000448012 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 TAF5LO75529 589 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 EGFRP00533 1210 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 MAP2K2P36507 400 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 GTF2IP78347 998 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 DACT2Q5SW24 774 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 ANGEL2Q5VTE6 544 aaKnown RBP13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 WBP1LQ9NX94 342 aa13.77□□□□□ -0.21
NPIPB3-202ENST00000448012 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 WTIPA6NIX2 430 aaPredicted RBP13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 FOXN1O15353 648 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 NF2P35240 595 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 EPHA10Q5JZY3 1008 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 CDCA7LQ96GN5 454 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 GMLQ99445 158 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 MYH3P11055 1940 aa13.76□□□□□ -0.21
NPIPB3-202ENST00000448012 UTYO14607 1347 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 MROH5Q6ZUA9 1318 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 CA12O43570 354 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 NOGQ13253 232 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 KIAA0825Q8IV33 1275 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 CDCA5Q96FF9 252 aa13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
NPIPB3-202ENST00000448012 MYO1BO43795 1136 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 FRAT2O75474 233 aaPredicted RBP13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 KLRK1P26718 216 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 FKBP1BP68106 108 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 TTLL12Q14166 644 aaPredicted RBP13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 METTL24Q5JXM2 366 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 RGMBQ6NW40 437 aa13.74□□□□□ -0.21
NPIPB3-202ENST00000448012 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 ZNF157P51786 506 aaPredicted RBP13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 LBX1P52954 281 aa13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 APOBEC3FQ8IUX4 373 aaKnown RBP13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
NPIPB3-202ENST00000448012 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 AOC2O75106 756 aa13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 SASH1O94885 1247 aa13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 IL1R1P14778 569 aa13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 HIBADHP31937 336 aaKnown RBP13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 RBM5P52756 815 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
NPIPB3-202ENST00000448012 ASTN2O75129 1339 aaPredicted RBP13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 F8W031 263 aaPredicted RBP13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 SNAP23O00161 211 aa13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 WNT10BO00744 389 aa13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
NPIPB3-202ENST00000448012 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms