RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 UPF3BQ9BZI7 483 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA6AQ9NYA3 693 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 MAGI1Q96QZ7 1491 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 CLASP1Q7Z460 1538 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 COQ9O75208 318 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 LMNAP02545 664 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 POLR2EP19388 210 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 PSMA5P28066 241 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 CCDC155Q8N6L0 562 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 FBF1Q8TES7 1133 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 SMC6Q96SB8 1091 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 STIM2Q9P246 746 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 PIK3C2GO75747 1445 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 IRX4P78413 519 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 FBXO38Q6PIJ6 1188 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 CEP128Q6ZU80 1094 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 OLFM3Q96PB7 478 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 EIF2AQ9BY44 585 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 SCHIP1Q9P0W5 487 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 AK9Q5TCS8 1911 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 VIL1P09327 827 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 HARSP12081 509 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 HCLS1P14317 486 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 S100A1P23297 94 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SSFA2P28290 1259 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SERPINB8P50452 374 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 CLCN6P51797 869 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ELF2Q15723 593 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 NDUFA5Q16718 116 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ALDH1L2Q3SY69 923 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 CPLX2Q6PUV4 134 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 ARHGAP45Q92619 1136 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 VPS18Q9P253 973 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 RNF14Q9UBS8 474 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 RPL26L1Q9UNX3 145 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 CAPN7Q9Y6W3 813 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 HNRNPCL1O60812 293 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 BRD1O95696 1058 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ATP11AP98196 1134 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SPAG1Q07617 926 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 KBTBD12Q3ZCT8 623 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 LEO1Q8WVC0 666 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 IWS1Q96ST2 819 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 GMEB1Q9Y692 573 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 EVC2Q86UK5 1308 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 LSM1O15116 133 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 ATP5HO75947 161 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PAX7P23759 505 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 GBP1P32455 592 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PAFAH1B1P43034 410 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ALS2CLQ60I27 953 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 IFT81Q8WYA0 676 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SEC62Q99442 399 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 HECW1Q76N89 1606 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 RTN3O95197 1032 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 VIMP08670 466 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 SKIP12755 728 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 NONOQ15233 471 aaKnown RBP eCLIP3.3□□□□□ -1.889e-7■■■■□ 20.8
CHD9-203ENST00000447540 ZNF710Q8N1W2 664 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 LRRC43Q8N309 656 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SDF4Q9BRK5 362 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 RAPGEF2Q9Y4G8 1499 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SAMD9Q5K651 1589 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 VAV2P52735 878 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 FAM186BQ8IYM0 893 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 KDM4CQ9H3R0 1056 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 COG6Q9Y2V7 657 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 TEX14Q8IWB6 1497 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SPECC1L-ADORA2AF8WAN1 911 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PPP2R3AQ06190 1150 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ARHGAP22Q7Z5H3 698 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ARHGAP24Q8N264 748 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 JPH2Q9BR39 696 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 MKL2Q9ULH7 1088 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 MYH11P35749 1972 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 BICDL2A1A5D9 508 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ZNF75DP51815 510 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ITIH3Q06033 890 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SAFB2Q14151 953 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-203ENST00000447540 WASHC4Q2M389 1173 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 ANKRD45Q5TZF3 282 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 TEKT4Q8WW24 435 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 DDX27Q96GQ7 796 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 UBN2Q6ZU65 1347 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 MACROD2A1Z1Q3 448 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 LRRIQ3A6PVS8 624 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 IDO1P14902 403 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 TYRO3Q06418 890 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 KRT32Q14532 448 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 IFI16Q16666 785 aaKnown RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 LONRF2Q1L5Z9 754 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 KMT5BQ4FZB7 885 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 GKAP1Q5VSY0 366 aaPredicted RBP3.3□□□□□ -1.88
CHD9-203ENST00000447540 EMBQ6PCB8 327 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SPATA21Q7Z572 469 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 FAM81AQ8TBF8 368 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 SIRT1Q96EB6 747 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 NESP48681 1621 aa3.3□□□□□ -1.88
CHD9-203ENST00000447540 PPIP5K1Q6PFW1 1433 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms