RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 ABCC6O95255 1503 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 GLI3P10071 1580 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 FOXP2O15409 715 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 RNF113AO15541 343 aaKnown RBP11.11□□□□□ -0.63
KLHL3-202ENST00000447439 PFKFB2O60825 505 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
KLHL3-202ENST00000447439 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
KLHL3-202ENST00000447439 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 ZAP70P43403 619 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 CCDC57Q2TAC2 916 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 C11orf57Q6ZUT1 292 aaPredicted RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 CCAR1Q8IX12 1150 aaKnown RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 SMARCC2Q8TAQ2 1214 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 TRIM5Q9C035 493 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 PUS7LQ9H0K6 701 aaKnown RBP11.1□□□□□ -0.63
KLHL3-202ENST00000447439 HELLSQ9NRZ9 838 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
KLHL3-202ENST00000447439 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 STRCP1A6NGW2 1772 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 POLR3DP05423 398 aaPredicted RBP11.09□□□□□ -0.63
KLHL3-202ENST00000447439 ZNF165P49910 485 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 RXRAP19793 462 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 ARID5BQ14865 1188 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 HLFQ16534 295 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 CCDC191Q8NCU4 936 aa11.09□□□□□ -0.63
KLHL3-202ENST00000447439 FDPSP14324 419 aaKnown RBP11.08□□□□□ -0.64
KLHL3-202ENST00000447439 IL2RBP14784 551 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 EVA1CP58658 441 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 DDX19AQ9NUU7 478 aaKnown RBP11.08□□□□□ -0.64
KLHL3-202ENST00000447439 SNAP23O00161 211 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 ME1P48163 572 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
KLHL3-202ENST00000447439 A0A0G2JS52 829 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 FGAP02671 866 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 TERF1P54274 439 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 CCDC144BQ3MJ40 725 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 CCDC144CPQ8IYA2 1237 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 PDCL3Q9H2J4 239 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 LAMB4A4D0S4 1761 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 ZNF75DP51815 510 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 HELBQ8NG08 1087 aaPredicted RBP11.07□□□□□ -0.64
KLHL3-202ENST00000447439 AIFM3Q96NN9 605 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 GREM2Q9H772 168 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
KLHL3-202ENST00000447439 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 ERVV-2B6SEH9 535 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 PRC1O43663 620 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 FSIP1Q8NA03 581 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 PIGBQ92521 554 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
KLHL3-202ENST00000447439 ISCA1Q9BUE6 129 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 ZSCAN16Q9H4T2 348 aaPredicted RBP11.06□□□□□ -0.64
KLHL3-202ENST00000447439 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 CLIC4Q9Y696 253 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 RFX7Q2KHR2 1363 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 CARMIL3Q8ND23 1372 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
KLHL3-202ENST00000447439 SNW1Q13573 536 aaKnown RBP11.06□□□□□ -0.64
KLHL3-202ENST00000447439 METTL24Q5JXM2 366 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 SPTLC3Q9NUV7 552 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 TJP1Q07157 1748 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
KLHL3-202ENST00000447439 CPDO75976 1380 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 UBE2Q2LH0YL09 131 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 DYNC1I1O14576 645 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 MCAMP43121 646 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 ANTXR2P58335 489 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 RBM43Q6ZSC3 357 aaKnown RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 SALL1Q9NSC2 1324 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 IFIT5Q13325 482 aaKnown RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 ISM2Q6H9L7 571 aa11.05□□□□□ -0.64
KLHL3-202ENST00000447439 NAA16Q6N069 864 aaPredicted RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
KLHL3-202ENST00000447439 GPR108Q9NPR9 543 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms