RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 GYG1P46976 350 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 KCNQ5Q9NR82 932 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
HLA-DOB-207ENST00000447394 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
HLA-DOB-207ENST00000447394 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
HLA-DOB-207ENST00000447394 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
HLA-DOB-207ENST00000447394 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
HLA-DOB-207ENST00000447394 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 RAD17O75943 681 aa16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 TIMM10P62072 90 aa16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 ADAMTSL1Q8N6G6 1762 aa16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
HLA-DOB-207ENST00000447394 A0A1B0GUL7 405 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 FZD9O00144 591 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 IGHDP01880 384 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 SLC5A1P13866 664 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 BCAMP50895 628 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 C15orf52Q6ZUT6 534 aaKnown RBP16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 LPIN2Q92539 896 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
HLA-DOB-207ENST00000447394 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 G3V3G9 751 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 AKAP11Q9UKA4 1901 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
HLA-DOB-207ENST00000447394 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 YY1P25490 414 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 PHKA1P46020 1223 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 CXCL9Q07325 125 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 HDAC1Q13547 482 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 FBXW7Q969H0 707 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 CD209Q9NNX6 404 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
HLA-DOB-207ENST00000447394 PSMD14O00487 310 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 AAMPQ13685 434 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 XAGE2Q96GT9 111 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
HLA-DOB-207ENST00000447394 NEFLP07196 543 aa16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 HSP90AB4PQ58FF6 505 aa16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 AACSQ86V21 672 aa16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 AKAP2Q9Y2D5 859 aa16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
HLA-DOB-207ENST00000447394 SCN4AP35499 1836 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 IL1R1P14778 569 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 GTF2IP78347 998 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 CIAPIN1Q6FI81 312 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 GPR108Q9NPR9 543 aa16.34■□□□□ 0.21
HLA-DOB-207ENST00000447394 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
HLA-DOB-207ENST00000447394 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOB-207ENST00000447394 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.2
HLA-DOB-207ENST00000447394 TDRD7Q8NHU6 1098 aaKnown RBP16.33■□□□□ 0.2
HLA-DOB-207ENST00000447394 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 SCARF1Q14162 830 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 DACT2Q5SW24 774 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 CERS5Q8N5B7 392 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 NMRK2Q9NPI5 230 aa16.32■□□□□ 0.2
HLA-DOB-207ENST00000447394 USP17L3A6NCW0 530 aa16.31■□□□□ 0.2
HLA-DOB-207ENST00000447394 USP17L4A6NCW7 530 aa16.31■□□□□ 0.2
HLA-DOB-207ENST00000447394 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
HLA-DOB-207ENST00000447394 GRIK5Q16478 980 aa16.31■□□□□ 0.2
HLA-DOB-207ENST00000447394 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
HLA-DOB-207ENST00000447394 USP17L1Q7RTZ2 530 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms