RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
RFC4-208ENST00000447345 SCNN1DP51172 638 aa14.84□□□□□ -0.03
RFC4-208ENST00000447345 MTX1Q13505 466 aa14.84□□□□□ -0.03
RFC4-208ENST00000447345 TNIP1Q15025 636 aa14.84□□□□□ -0.03
RFC4-208ENST00000447345 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
RFC4-208ENST00000447345 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
RFC4-208ENST00000447345 EPHX2P34913 555 aa14.83□□□□□ -0.04
RFC4-208ENST00000447345 RRP1P56182 461 aaKnown RBP14.83□□□□□ -0.04
RFC4-208ENST00000447345 EAPPQ56P03 285 aaPredicted RBP14.83□□□□□ -0.04
RFC4-208ENST00000447345 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
RFC4-208ENST00000447345 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
RFC4-208ENST00000447345 DDX19BQ9UMR2 479 aa14.83□□□□□ -0.04
RFC4-208ENST00000447345 IRS2Q9Y4H2 1338 aa14.83□□□□□ -0.04
RFC4-208ENST00000447345 SHTN1A0MZ66 631 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 TOMM70O94826 608 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 PDE8BO95263 885 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 POTEJP0CG39 1038 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 EPS15P42566 896 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 GYG1P46976 350 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 ZNF804AQ7Z570 1209 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 COA1Q9GZY4 146 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 TAF1DQ9H5J8 278 aaPredicted RBP14.82□□□□□ -0.04
RFC4-208ENST00000447345 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
RFC4-208ENST00000447345 CIAO1O76071 339 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 UBE4AQ14139 1066 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 PUM3Q15397 648 aaKnown RBP14.81□□□□□ -0.04
RFC4-208ENST00000447345 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 MXD3Q9BW11 206 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 GPRC5DQ9NZD1 345 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 JAG2Q9Y219 1238 aa14.81□□□□□ -0.04
RFC4-208ENST00000447345 POLR2AP24928 1970 aaKnown RBP14.81□□□□□ -0.04
RFC4-208ENST00000447345 USP17L3A6NCW0 530 aa14.8□□□□□ -0.04
RFC4-208ENST00000447345 USP17L4A6NCW7 530 aa14.8□□□□□ -0.04
RFC4-208ENST00000447345 IL15P40933 162 aaPredicted RBP14.8□□□□□ -0.04
RFC4-208ENST00000447345 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
RFC4-208ENST00000447345 C15orf52Q6ZUT6 534 aaKnown RBP14.8□□□□□ -0.04
RFC4-208ENST00000447345 USP17L1Q7RTZ2 530 aa14.8□□□□□ -0.04
RFC4-208ENST00000447345 CD209Q9NNX6 404 aa14.8□□□□□ -0.04
RFC4-208ENST00000447345 GTF2IP78347 998 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 ATP8B2P98198 1209 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 ATP2B3Q16720 1220 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 ECM29Q5VYK3 1845 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 RSBN1LQ6PCB5 846 aaPredicted RBP14.79□□□□□ -0.04
RFC4-208ENST00000447345 MICALL2Q8IY33 904 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 RBM46Q8TBY0 533 aaKnown RBP14.79□□□□□ -0.04
RFC4-208ENST00000447345 CEP126Q9P2H0 1117 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 IQSEC3Q9UPP2 1182 aaPredicted RBP14.79□□□□□ -0.04
RFC4-208ENST00000447345 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
RFC4-208ENST00000447345 VIL1P09327 827 aaKnown RBP14.78□□□□□ -0.04
RFC4-208ENST00000447345 IFIT1P09914 478 aaKnown RBP14.78□□□□□ -0.04
RFC4-208ENST00000447345 SLC5A1P13866 664 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 TFCP2Q12800 502 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 OS9Q13438 667 aaPredicted RBP14.78□□□□□ -0.04
RFC4-208ENST00000447345 POLA2Q14181 598 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 DACT2Q5SW24 774 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 ZBTB40Q9NUA8 1239 aa14.78□□□□□ -0.04
RFC4-208ENST00000447345 CNOT7Q9UIV1 285 aaKnown RBP14.78□□□□□ -0.04
RFC4-208ENST00000447345 ZNF609O15014 1411 aa14.77□□□□□ -0.04
RFC4-208ENST00000447345 SURF6O75683 361 aaKnown RBP14.77□□□□□ -0.05
RFC4-208ENST00000447345 FGFR2P21802 821 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 HIBADHP31937 336 aaKnown RBP14.77□□□□□ -0.05
RFC4-208ENST00000447345 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
RFC4-208ENST00000447345 TTLL5Q6EMB2 1281 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 SMC1BQ8NDV3 1235 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 TRPM4Q8TD43 1214 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.05
RFC4-208ENST00000447345 ADARB2Q9NS39 739 aaKnown RBP14.77□□□□□ -0.05
RFC4-208ENST00000447345 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.77□□□□□ -0.05
RFC4-208ENST00000447345 TRPM7Q96QT4 1865 aa14.77□□□□□ -0.05
RFC4-208ENST00000447345 H7C1D1 291 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 IL1R1P14778 569 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 RPS12P25398 132 aaKnown RBP14.76□□□□□ -0.05
RFC4-208ENST00000447345 ADORA1P30542 326 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 BCAMP50895 628 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 TBC1D10BQ4KMP7 808 aaPredicted RBP14.76□□□□□ -0.05
RFC4-208ENST00000447345 CAVIN4Q5BKX8 364 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 RBM26Q5T8P6 1007 aaKnown RBP14.76□□□□□ -0.05
RFC4-208ENST00000447345 STRIP1Q5VSL9 837 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 SAMD7Q7Z3H4 446 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
RFC4-208ENST00000447345 LDHDQ86WU2 507 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 LPIN2Q92539 896 aa14.76□□□□□ -0.05
RFC4-208ENST00000447345 FRAT2O75474 233 aaPredicted RBP14.75□□□□□ -0.05
RFC4-208ENST00000447345 EGFRP00533 1210 aa14.75□□□□□ -0.05
RFC4-208ENST00000447345 CHAF1AQ13111 956 aaPredicted RBP14.75□□□□□ -0.05
RFC4-208ENST00000447345 MAP1SQ66K74 1059 aaPredicted RBP14.75□□□□□ -0.05
RFC4-208ENST00000447345 DPF2Q92785 391 aa14.75□□□□□ -0.05
RFC4-208ENST00000447345 CRBNQ96SW2 442 aa14.75□□□□□ -0.05
RFC4-208ENST00000447345 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
RFC4-208ENST00000447345 EXOC6BQ9Y2D4 811 aa14.75□□□□□ -0.05
RFC4-208ENST00000447345 COL1A1P02452 1464 aaPredicted RBP14.75□□□□□ -0.05
RFC4-208ENST00000447345 MYO3BQ8WXR4 1341 aa14.74□□□□□ -0.05
RFC4-208ENST00000447345 A0A1B0GUL7 405 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms