RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 USP28Q96RU2 1077 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 FBXL16Q8N461 479 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 DCAF5Q96JK2 942 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 ANO10Q9NW15 660 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 MEGF6O75095 1541 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 KINO60870 393 aaKnown RBP22.36■■□□□ 1.17
SDCBP-204ENST00000447182 LMBR1LQ6UX01 489 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 ATG9AQ7Z3C6 839 aa22.36■■□□□ 1.17
SDCBP-204ENST00000447182 LAMB4A4D0S4 1761 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 SPEF2Q9C093 1822 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
SDCBP-204ENST00000447182 CBX1P83916 185 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 FOXO4P98177 505 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 FTOQ9C0B1 505 aaKnown RBP eCLIP22.35■■□□□ 1.175e-6■□□□□ 9.5
SDCBP-204ENST00000447182 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
SDCBP-204ENST00000447182 E7EWF7 191 aa22.34■■□□□ 1.17
SDCBP-204ENST00000447182 H7C1W4 665 aa22.34■■□□□ 1.17
SDCBP-204ENST00000447182 TPD52L1Q16890 204 aaPredicted RBP22.34■■□□□ 1.17
SDCBP-204ENST00000447182 DHX40Q8IX18 779 aaKnown RBP22.34■■□□□ 1.17
SDCBP-204ENST00000447182 FEZ1Q99689 392 aa22.34■■□□□ 1.17
SDCBP-204ENST00000447182 GOLIM4O00461 696 aa22.34■■□□□ 1.17
SDCBP-204ENST00000447182 HSPD1P10809 573 aaKnown RBP22.34■■□□□ 1.17
SDCBP-204ENST00000447182 PDIA3P30101 505 aaKnown RBP22.34■■□□□ 1.17
SDCBP-204ENST00000447182 PRDM10Q9NQV6 1147 aa22.34■■□□□ 1.17
SDCBP-204ENST00000447182 GLI3P10071 1580 aa22.33■■□□□ 1.17
SDCBP-204ENST00000447182 BECN2A8MW95 431 aa22.33■■□□□ 1.17
SDCBP-204ENST00000447182 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.17
SDCBP-204ENST00000447182 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
SDCBP-204ENST00000447182 EVCP57679 992 aa22.33■■□□□ 1.16
SDCBP-204ENST00000447182 ZC3H6P61129 1189 aaKnown RBP22.33■■□□□ 1.16
SDCBP-204ENST00000447182 CCT2P78371 535 aaKnown RBP22.33■■□□□ 1.16
SDCBP-204ENST00000447182 CCDC112Q8NEF3 446 aa22.33■■□□□ 1.16
SDCBP-204ENST00000447182 IL15P40933 162 aaPredicted RBP22.32■■□□□ 1.16
SDCBP-204ENST00000447182 GTPBP4Q9BZE4 634 aaKnown RBP22.32■■□□□ 1.16
SDCBP-204ENST00000447182 KCND1Q9NSA2 647 aa22.32■■□□□ 1.16
SDCBP-204ENST00000447182 CARMIL3Q8ND23 1372 aa22.32■■□□□ 1.16
SDCBP-204ENST00000447182 CEP57L1Q8IYX8 460 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 FSIP1Q8NA03 581 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 PKD1L3Q7Z443 1732 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 ME1P48163 572 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 CEP135Q66GS9 1140 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 NEUROD6Q96NK8 337 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 NAT10Q9H0A0 1025 aaKnown RBP22.31■■□□□ 1.16
SDCBP-204ENST00000447182 NCOA5Q9HCD5 579 aaKnown RBP22.31■■□□□ 1.16
SDCBP-204ENST00000447182 RTEL1Q9NZ71 1219 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 COL18A1P39060 1754 aa22.31■■□□□ 1.16
SDCBP-204ENST00000447182 MAST3O60307 1309 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 A0A1W2PQ27 194 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 A0A1W2PQ64 194 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 A0A1W2PQD8 194 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 CYP27B1O15528 508 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 RNF113AO15541 343 aaKnown RBP22.3■■□□□ 1.16
SDCBP-204ENST00000447182 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 NYAP1Q6ZVC0 841 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 FMR1NBQ8N0W7 255 aaPredicted RBP22.3■■□□□ 1.16
SDCBP-204ENST00000447182 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
SDCBP-204ENST00000447182 U2AF2P26368 475 aaKnown RBP eCLIP22.3■■□□□ 1.16
SDCBP-204ENST00000447182 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.3■■□□□ 1.16
SDCBP-204ENST00000447182 MRPS27Q92552 414 aaKnown RBP22.3■■□□□ 1.16
SDCBP-204ENST00000447182 SKILP12757 684 aa22.29■■□□□ 1.16
SDCBP-204ENST00000447182 FOSBP53539 338 aa22.29■■□□□ 1.16
SDCBP-204ENST00000447182 CCZ1BP86790 482 aa22.29■■□□□ 1.16
SDCBP-204ENST00000447182 CCZ1P86791 482 aaPredicted RBP22.29■■□□□ 1.16
SDCBP-204ENST00000447182 SLFNL1Q499Z3 407 aa22.29■■□□□ 1.16
SDCBP-204ENST00000447182 PCDHA7Q9UN72 937 aa22.29■■□□□ 1.16
SDCBP-204ENST00000447182 FDPSP14324 419 aaKnown RBP22.28■■□□□ 1.16
SDCBP-204ENST00000447182 TIMM10P62072 90 aa22.28■■□□□ 1.16
SDCBP-204ENST00000447182 CGNQ9P2M7 1197 aaKnown RBP22.28■■□□□ 1.16
SDCBP-204ENST00000447182 ARID5BQ14865 1188 aa22.28■■□□□ 1.16
SDCBP-204ENST00000447182 ATG3Q9NT62 314 aa22.28■■□□□ 1.16
SDCBP-204ENST00000447182 TJP1Q07157 1748 aa22.28■■□□□ 1.16
SDCBP-204ENST00000447182 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 CCDC69A6NI79 296 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 EYA2O00167 538 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 CIAO1O76071 339 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 GSDMDP57764 484 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 BPIFA3Q9BQP9 254 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
SDCBP-204ENST00000447182 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 NUP188Q5SRE5 1749 aa22.27■■□□□ 1.16
SDCBP-204ENST00000447182 PARP4Q9UKK3 1724 aaKnown RBP22.27■■□□□ 1.16
SDCBP-204ENST00000447182 IFIT1P09914 478 aaKnown RBP22.27■■□□□ 1.15
SDCBP-204ENST00000447182 PTPN14Q15678 1187 aa22.27■■□□□ 1.15
SDCBP-204ENST00000447182 OSBPL5Q9H0X9 879 aaPredicted RBP22.27■■□□□ 1.15
SDCBP-204ENST00000447182 OGFRQ9NZT2 677 aa22.27■■□□□ 1.15
SDCBP-204ENST00000447182 IMPACTQ9P2X3 320 aa22.27■■□□□ 1.15
SDCBP-204ENST00000447182 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.15
SDCBP-204ENST00000447182 SPDYE4A6NLX3 237 aa22.26■■□□□ 1.15
SDCBP-204ENST00000447182 USP27XA6NNY8 438 aa22.26■■□□□ 1.15
SDCBP-204ENST00000447182 CABP4P57796 275 aa22.26■■□□□ 1.15
SDCBP-204ENST00000447182 AOPEPQ8N6M6 819 aa22.26■■□□□ 1.15
SDCBP-204ENST00000447182 LINC00301Q8NCQ3 95 aa22.26■■□□□ 1.15
SDCBP-204ENST00000447182 GUCY1B3Q02153 619 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 NBPF26B4DH59 902 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 YEATS4O95619 227 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
SDCBP-204ENST00000447182 NBPF10Q6P3W6 841 aaKnown RBP22.25■■□□□ 1.15
SDCBP-204ENST00000447182 NBPF15Q8N660 670 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms