RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 MCTP1Q6DN14 999 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 STYK1Q6J9G0 422 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 ZFP91Q96JP5 570 aaPredicted RBP15.61■□□□□ 0.09
DDX56-206ENST00000446987 PIM2Q9P1W9 311 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 BRD2P25440 801 aaKnown RBP15.61■□□□□ 0.09
DDX56-206ENST00000446987 HOXA10P31260 410 aaPredicted RBP15.61■□□□□ 0.09
DDX56-206ENST00000446987 MASTLQ96GX5 879 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 SPEF2Q9C093 1822 aa15.61■□□□□ 0.09
DDX56-206ENST00000446987 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
DDX56-206ENST00000446987 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 NPR1P16066 1061 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 MMP14P50281 582 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 UBE3BQ7Z3V4 1068 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 ARHGAP45Q92619 1136 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 EFCC1Q9HA90 598 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 BCS1LQ9Y276 419 aa15.6■□□□□ 0.09
DDX56-206ENST00000446987 UTYO14607 1347 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 CHD4Q14839 1912 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 U2AF2P26368 475 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■■■□□ 17.4
DDX56-206ENST00000446987 SYAP1Q96A49 352 aaPredicted RBP15.59■□□□□ 0.09
DDX56-206ENST00000446987 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 SBF1O95248 1867 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
DDX56-206ENST00000446987 TERF2Q15554 542 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
DDX56-206ENST00000446987 GPT2Q8TD30 523 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 C7orf43Q8WVR3 580 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 ZNF622Q969S3 477 aaKnown RBP eCLIP15.59■□□□□ 0.098e-7■■■□□ 14.9
DDX56-206ENST00000446987 NLRP3Q96P20 1036 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 TSPY26PQ9H489 355 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 CTNNA3Q9UI47 895 aa15.59■□□□□ 0.09
DDX56-206ENST00000446987 GRM8O00222 908 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 RLBP1P12271 317 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 RABEP1Q15276 862 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 DALRD3Q5D0E6 543 aaKnown RBP15.58■□□□□ 0.08
DDX56-206ENST00000446987 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 KAZALD1Q96I82 304 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.08
DDX56-206ENST00000446987 API5Q9BZZ5 524 aaKnown RBP15.58■□□□□ 0.08
DDX56-206ENST00000446987 GPR162Q16538 588 aa15.57■□□□□ 0.08
DDX56-206ENST00000446987 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
DDX56-206ENST00000446987 PDE8AO60658 829 aa15.57■□□□□ 0.08
DDX56-206ENST00000446987 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
DDX56-206ENST00000446987 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
DDX56-206ENST00000446987 OLFM4Q6UX06 510 aa15.57■□□□□ 0.08
DDX56-206ENST00000446987 DUOX1Q9NRD9 1551 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 CCDC88AQ3V6T2 1871 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 ZBTB22O15209 634 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 CTSWP56202 376 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
DDX56-206ENST00000446987 CNKSR1Q969H4 720 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 CRAMP1Q96RY5 1269 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 USP44Q9H0E7 712 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 GEMIN8Q9NWZ8 242 aaKnown RBP15.56■□□□□ 0.08
DDX56-206ENST00000446987 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
DDX56-206ENST00000446987 FOXO4P98177 505 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 NUCB1Q02818 461 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 TTLL11Q8NHH1 800 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 TSC1Q92574 1164 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 RPGRQ92834 1020 aaKnown RBP15.55■□□□□ 0.08
DDX56-206ENST00000446987 SUCLG2Q96I99 432 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 RTL9Q8NET4 1388 aa15.55■□□□□ 0.08
DDX56-206ENST00000446987 CD2BP2O95400 341 aaKnown RBP15.54■□□□□ 0.08
DDX56-206ENST00000446987 PRELPP51888 382 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 ZKSCAN2Q63HK3 967 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 SYCE3A1L190 88 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 NFKBIEO00221 500 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 RIOK3O14730 519 aaKnown RBP15.54■□□□□ 0.08
DDX56-206ENST00000446987 C21orf2O43822 256 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 CELF1Q92879 486 aaKnown RBP15.54■□□□□ 0.08
DDX56-206ENST00000446987 FAM53CQ9NYF3 392 aa15.54■□□□□ 0.08
DDX56-206ENST00000446987 CSF1RP07333 972 aa15.53■□□□□ 0.08
DDX56-206ENST00000446987 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
DDX56-206ENST00000446987 TMEM57Q8N5G2 664 aa15.53■□□□□ 0.08
DDX56-206ENST00000446987 KIAA1524Q8TCG1 905 aa15.53■□□□□ 0.08
DDX56-206ENST00000446987 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
DDX56-206ENST00000446987 CCDC85AQ96PX6 553 aaPredicted RBP15.53■□□□□ 0.08
DDX56-206ENST00000446987 GREM2Q9H772 168 aa15.53■□□□□ 0.08
DDX56-206ENST00000446987 DICER1Q9UPY3 1922 aaKnown RBP15.53■□□□□ 0.08
DDX56-206ENST00000446987 TIAM2Q8IVF5 1701 aa15.53■□□□□ 0.08
DDX56-206ENST00000446987 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.08
DDX56-206ENST00000446987 PRPF40AO75400 957 aaKnown RBP15.52■□□□□ 0.08
DDX56-206ENST00000446987 GRAPQ13588 217 aa15.52■□□□□ 0.08
DDX56-206ENST00000446987 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
DDX56-206ENST00000446987 KRT222Q8N1A0 295 aa15.52■□□□□ 0.08
DDX56-206ENST00000446987 GRAPLQ8TC17 118 aaPredicted RBP15.52■□□□□ 0.08
DDX56-206ENST00000446987 MEIS3Q99687 375 aa15.52■□□□□ 0.08
DDX56-206ENST00000446987 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
DDX56-206ENST00000446987 COL4A5P29400 1685 aa15.52■□□□□ 0.07
DDX56-206ENST00000446987 ALDH1B1P30837 517 aa15.52■□□□□ 0.07
DDX56-206ENST00000446987 RASSF7Q02833 373 aa15.52■□□□□ 0.07
DDX56-206ENST00000446987 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.07
DDX56-206ENST00000446987 C9orf78Q9NZ63 289 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms