RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CLEC11AQ9Y240 323 aa18.56■□□□□ 0.56
HDAC4-204ENST00000446876 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
HDAC4-204ENST00000446876 ITPRIPQ8IWB1 547 aa18.55■□□□□ 0.56
HDAC4-204ENST00000446876 MICALL2Q8IY33 904 aa18.55■□□□□ 0.56
HDAC4-204ENST00000446876 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
HDAC4-204ENST00000446876 FBXW7Q969H0 707 aa18.55■□□□□ 0.56
HDAC4-204ENST00000446876 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
HDAC4-204ENST00000446876 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 PODNQ7Z5L7 613 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 PNMA8AQ86V59 439 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-204ENST00000446876 TRPM4Q8TD43 1214 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 SIL1Q9H173 461 aa18.54■□□□□ 0.56
HDAC4-204ENST00000446876 ADARB2Q9NS39 739 aaKnown RBP18.54■□□□□ 0.56
HDAC4-204ENST00000446876 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
HDAC4-204ENST00000446876 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
HDAC4-204ENST00000446876 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
HDAC4-204ENST00000446876 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-204ENST00000446876 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
HDAC4-204ENST00000446876 USP17L3A6NCW0 530 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 USP17L4A6NCW7 530 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 EYA2O00167 538 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 GNAI2P04899 355 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 HTRA3P83110 453 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 RSBN1LQ6PCB5 846 aaPredicted RBP18.52■□□□□ 0.56
HDAC4-204ENST00000446876 C15orf52Q6ZUT6 534 aaKnown RBP18.52■□□□□ 0.56
HDAC4-204ENST00000446876 USP50Q70EL3 339 aaPredicted RBP18.52■□□□□ 0.56
HDAC4-204ENST00000446876 USP17L1Q7RTZ2 530 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
HDAC4-204ENST00000446876 EGFRP00533 1210 aa18.51■□□□□ 0.55
HDAC4-204ENST00000446876 RPS12P25398 132 aaKnown RBP18.51■□□□□ 0.55
HDAC4-204ENST00000446876 HIRAP54198 1017 aaPredicted RBP18.51■□□□□ 0.55
HDAC4-204ENST00000446876 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
HDAC4-204ENST00000446876 ATG9AQ7Z3C6 839 aa18.51■□□□□ 0.55
HDAC4-204ENST00000446876 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
HDAC4-204ENST00000446876 DPF2Q92785 391 aa18.51■□□□□ 0.55
HDAC4-204ENST00000446876 ZNF609O15014 1411 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 H7C1D1 291 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 SRGAP3O43295 1099 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 GYG1P46976 350 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 TBC1D10BQ4KMP7 808 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-204ENST00000446876 DACT2Q5SW24 774 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 ZNF804AQ7Z570 1209 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 JAG2Q9Y219 1238 aa18.5■□□□□ 0.55
HDAC4-204ENST00000446876 PDE8BO95263 885 aa18.49■□□□□ 0.55
HDAC4-204ENST00000446876 GTF2IP78347 998 aa18.49■□□□□ 0.55
HDAC4-204ENST00000446876 MTX1Q13505 466 aa18.49■□□□□ 0.55
HDAC4-204ENST00000446876 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
HDAC4-204ENST00000446876 GMLQ99445 158 aa18.49■□□□□ 0.55
HDAC4-204ENST00000446876 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 ZBTB7BO15156 539 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-204ENST00000446876 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-204ENST00000446876 APLP1P51693 650 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 STRIP1Q5VSL9 837 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 AGBL3Q8NEM8 1001 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 FAM84BQ96KN1 310 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-204ENST00000446876 COPRSQ9NQ92 184 aa18.48■□□□□ 0.55
HDAC4-204ENST00000446876 POLR2AP24928 1970 aaKnown RBP18.48■□□□□ 0.55
HDAC4-204ENST00000446876 CIAO1O76071 339 aa18.47■□□□□ 0.55
HDAC4-204ENST00000446876 IL1R1P14778 569 aa18.47■□□□□ 0.55
HDAC4-204ENST00000446876 FMR1Q06787 632 aaKnown RBP eCLIP18.47■□□□□ 0.55
HDAC4-204ENST00000446876 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
HDAC4-204ENST00000446876 PASKQ96RG2 1323 aa18.47■□□□□ 0.55
HDAC4-204ENST00000446876 ARAP2Q8WZ64 1704 aa18.46■□□□□ 0.55
HDAC4-204ENST00000446876 FGFR2P21802 821 aa18.46■□□□□ 0.55
HDAC4-204ENST00000446876 HIBADHP31937 336 aaKnown RBP18.46■□□□□ 0.55
HDAC4-204ENST00000446876 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
HDAC4-204ENST00000446876 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.55
HDAC4-204ENST00000446876 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
HDAC4-204ENST00000446876 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-204ENST00000446876 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
HDAC4-204ENST00000446876 TRAF5O00463 557 aa18.45■□□□□ 0.54
HDAC4-204ENST00000446876 USP17L8P0C7I0 530 aa18.45■□□□□ 0.54
HDAC4-204ENST00000446876 ZNF280AP59817 542 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-204ENST00000446876 CERS5Q8N5B7 392 aa18.45■□□□□ 0.54
HDAC4-204ENST00000446876 FBXO3Q9UK99 471 aa18.45■□□□□ 0.54
HDAC4-204ENST00000446876 TRPM7Q96QT4 1865 aa18.45■□□□□ 0.54
HDAC4-204ENST00000446876 ASTN2O75129 1339 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-204ENST00000446876 IL15P40933 162 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-204ENST00000446876 BCAMP50895 628 aa18.44■□□□□ 0.54
HDAC4-204ENST00000446876 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
HDAC4-204ENST00000446876 FBXO33Q7Z6M2 555 aa18.44■□□□□ 0.54
HDAC4-204ENST00000446876 KIAA0825Q8IV33 1275 aa18.44■□□□□ 0.54
HDAC4-204ENST00000446876 TDRD7Q8NHU6 1098 aaKnown RBP18.44■□□□□ 0.54
HDAC4-204ENST00000446876 GLIS2Q9BZE0 524 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-204ENST00000446876 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
HDAC4-204ENST00000446876 MYO3BQ8WXR4 1341 aa18.44■□□□□ 0.54
HDAC4-204ENST00000446876 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
HDAC4-204ENST00000446876 MS4A1P11836 297 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 SLC5A1P13866 664 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 VPS37DQ86XT2 251 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 MYOZ2Q9NPC6 264 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 PGAP2Q9UHJ9 254 aa18.43■□□□□ 0.54
HDAC4-204ENST00000446876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms