RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 CPLX3Q8WVH0 158 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 EXOC1Q9NV70 894 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 CENPHQ9H3R5 247 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
ATG9A-215ENST00000446716 CALML3P27482 149 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 FAM114A1Q8IWE2 563 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
ATG9A-215ENST00000446716 YEATS4O95619 227 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.42■□□□□ 0.86
ATG9A-215ENST00000446716 RLBP1P12271 317 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
ATG9A-215ENST00000446716 ERVV-2B6SEH9 535 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 CHL1O00533 1208 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 ZSCAN12O43309 604 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 ZNF408Q9H9D4 720 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 ADGRL2O95490 1459 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 SYKP43405 635 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 ZRSR2Q15696 482 aaKnown RBP20.41■□□□□ 0.86
ATG9A-215ENST00000446716 CHST3Q7LGC8 479 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 MAST3O60307 1309 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
ATG9A-215ENST00000446716 MACROD2A1Z1Q3 448 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 STAT6P42226 847 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 RAB3GAP1Q15042 981 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 FERMT2Q96AC1 680 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 STX1AQ16623 288 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 SUPT20HQ8NEM7 779 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 ZBTB40Q9NUA8 1239 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 TAX1BP1Q86VP1 789 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 SAP30BPQ9UHR5 308 aaKnown RBP20.4■□□□□ 0.86
ATG9A-215ENST00000446716 PUF60Q9UHX1 559 aaKnown RBP20.4■□□□□ 0.86
ATG9A-215ENST00000446716 RMND1Q9NWS8 449 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 USO1O60763 962 aaKnown RBP20.4■□□□□ 0.86
ATG9A-215ENST00000446716 ISM2Q6H9L7 571 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 TRIM47Q96LD4 638 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 PICK1Q9NRD5 415 aa20.4■□□□□ 0.86
ATG9A-215ENST00000446716 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.85
ATG9A-215ENST00000446716 ZSCAN22P10073 491 aaPredicted RBP20.39■□□□□ 0.85
ATG9A-215ENST00000446716 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
ATG9A-215ENST00000446716 KCNG4Q8TDN1 519 aa20.39■□□□□ 0.85
ATG9A-215ENST00000446716 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
ATG9A-215ENST00000446716 USP37Q86T82 979 aa20.39■□□□□ 0.85
ATG9A-215ENST00000446716 TRIM75PA6NK02 468 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 GNA11P29992 359 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 TCHPQ9BT92 498 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 PDE6BP35913 854 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 RAD50Q92878 1312 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 KIF5CO60282 957 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 AFMP43652 599 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 TNNI3KQ59H18 835 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 CLIP2Q9UDT6 1046 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 FPGT-TNNI3KV9GXZ4 949 aa20.38■□□□□ 0.85
ATG9A-215ENST00000446716 TAF5LO75529 589 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 UBE2HP62256 183 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 XAGE2Q96GT9 111 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 DNA2P51530 1060 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 BIN2Q9UBW5 565 aaPredicted RBP20.37■□□□□ 0.85
ATG9A-215ENST00000446716 CA8P35219 290 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 DHX32Q7L7V1 743 aaKnown RBP20.37■□□□□ 0.85
ATG9A-215ENST00000446716 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
ATG9A-215ENST00000446716 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 MMRN2Q9H8L6 949 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 HELLSQ9NRZ9 838 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 H0YHG0 523 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 PARP1P09874 1014 aaKnown RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 GBP2P32456 591 aaPredicted RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 KRT79Q5XKE5 535 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 ZNF165P49910 485 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 MTERF4Q7Z6M4 381 aaKnown RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 NIM1KQ8IY84 436 aa20.36■□□□□ 0.85
ATG9A-215ENST00000446716 CTNNBL1Q8WYA6 563 aaPredicted RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 QTRT2Q9H974 415 aaKnown RBP20.36■□□□□ 0.85
ATG9A-215ENST00000446716 USP19O94966 1318 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 CTNNA2P26232 953 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 GCKRQ14397 625 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 RRAGBQ5VZM2 374 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 LPIN2Q92539 896 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 TMOD4Q9NZQ9 345 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 KIF4BQ2VIQ3 1234 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 PHACTR2O75167 634 aa20.35■□□□□ 0.85
ATG9A-215ENST00000446716 KIF2AO00139 706 aaPredicted RBP20.34■□□□□ 0.85
ATG9A-215ENST00000446716 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
ATG9A-215ENST00000446716 FAM193AP78312 1265 aa20.34■□□□□ 0.85
ATG9A-215ENST00000446716 ASIC1P78348 528 aa20.34■□□□□ 0.85
ATG9A-215ENST00000446716 MARCKSP29966 332 aaPredicted RBP20.34■□□□□ 0.85
ATG9A-215ENST00000446716 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
ATG9A-215ENST00000446716 ZKSCAN3Q9BRR0 538 aa20.34■□□□□ 0.85
ATG9A-215ENST00000446716 TNNT1P13805 278 aa20.34■□□□□ 0.85
ATG9A-215ENST00000446716 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms