RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZMYM4Q5VZL5 1548 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 MIPOL1Q8TD10 442 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 FEZ2Q9UHY8 353 aaPredicted RBP8.93□□□□□ -0.98
SMG1-202ENST00000446231 PIK3C2GO75747 1445 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 KIF5AQ12840 1032 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 VPS37DQ86XT2 251 aa8.93□□□□□ -0.98
SMG1-202ENST00000446231 TRIM21P19474 475 aaKnown RBP8.92□□□□□ -0.98
SMG1-202ENST00000446231 NOP2P46087 812 aaKnown RBP8.92□□□□□ -0.98
SMG1-202ENST00000446231 NAA16Q6N069 864 aaPredicted RBP8.92□□□□□ -0.98
SMG1-202ENST00000446231 KRI1Q8N9T8 703 aaKnown RBP8.92□□□□□ -0.98
SMG1-202ENST00000446231 CAPS2Q9BXY5 557 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 EID1Q9Y6B2 187 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 EFCAB5A4FU69 1503 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 A0A1B0GVL5 298 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 BRAPQ7Z569 592 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 EHBP1L1Q8N3D4 1523 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 SPATA24Q86W54 205 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 RAB11FIP4Q86YS3 637 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 PDE4DIPQ5VU43 2346 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 FYB1O15117 783 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 CCDC38Q502W7 563 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 PRAG1Q86YV5 1406 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 ANKRD18BA2A2Z9 1011 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 PALD1Q9ULE6 856 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 NEDD9Q14511 834 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 CC2D1AQ6P1N0 951 aaPredicted RBP8.92□□□□□ -0.98
SMG1-202ENST00000446231 ASXL1Q8IXJ9 1541 aa8.92□□□□□ -0.98
SMG1-202ENST00000446231 CUL4AQ13619 759 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 GBP5Q96PP8 586 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 PHLPP2Q6ZVD8 1323 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 AFMP43652 599 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TTC41PQ6P2S7 1318 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 NPC1L1Q9UHC9 1359 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TTC14Q96N46 770 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 PRG4Q92954 1404 aaPredicted RBP8.91□□□□□ -0.98
SMG1-202ENST00000446231 PDS5BQ9NTI5 1447 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 NCBP3Q53F19 620 aaKnown RBP8.91□□□□□ -0.98
SMG1-202ENST00000446231 SELENOOQ9BVL4 669 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 KRT18P05783 430 aaKnown RBP8.91□□□□□ -0.98
SMG1-202ENST00000446231 VIMP08670 466 aaKnown RBP8.91□□□□□ -0.98
SMG1-202ENST00000446231 FAM173BQ6P4H8 233 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TM6SF1Q9BZW5 370 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 CEP85LQ5SZL2 805 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 APOBRQ0VD83 1088 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TSG101Q99816 390 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 LUC7L3O95232 432 aaKnown RBP8.91□□□□□ -0.98
SMG1-202ENST00000446231 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TRIM35Q9UPQ4 493 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 SNX14Q9Y5W7 946 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 MACROD2A1Z1Q3 448 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 BIRC2Q13490 618 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 TSNAXIP1Q2TAA8 658 aa8.91□□□□□ -0.98
SMG1-202ENST00000446231 RBM6P78332 1123 aaKnown RBP8.9□□□□□ -0.98
SMG1-202ENST00000446231 ATP2B2Q01814 1243 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 JAKMIP2Q96AA8 810 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 CEP63Q96MT8 703 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 TAOK3Q9H2K8 898 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 GAPVD1Q14C86 1478 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 ANKRD62A6NC57 917 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 JAK2O60674 1132 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 GUCY2CP25092 1073 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.98
SMG1-202ENST00000446231 FBF1Q8TES7 1133 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 LRRC45Q96CN5 670 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 CDC23Q9UJX2 597 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 GOLGA8KD6RF30 607 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 FAM204AQ9H8W3 233 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 NSD2O96028 1365 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 SPATS2LQ9NUQ6 558 aaKnown RBP8.9□□□□□ -0.98
SMG1-202ENST00000446231 NLRP6P59044 892 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 CACNA2D4Q7Z3S7 1137 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 NOX5Q96PH1 765 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 NFE2L3Q9Y4A8 694 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 SAMM50Q9Y512 469 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 PPARDQ03181 441 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 WWC3Q9ULE0 1092 aa8.9□□□□□ -0.98
SMG1-202ENST00000446231 SLC27A2O14975 620 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 AFAP1Q8N556 730 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 CCDC51Q96ER9 411 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 ALDH3A1P30838 453 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 ZFYVE27Q5T4F4 411 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 SCAF11Q99590 1463 aaKnown RBP8.9□□□□□ -0.99
SMG1-202ENST00000446231 MICAL1Q8TDZ2 1067 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 SGSM2O43147 1006 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 SETDB1Q15047 1291 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 CCDC57Q2TAC2 916 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.99
SMG1-202ENST00000446231 C11orf57Q6ZUT1 292 aaPredicted RBP8.9□□□□□ -0.99
SMG1-202ENST00000446231 ZHX3Q9H4I2 956 aa8.9□□□□□ -0.99
SMG1-202ENST00000446231 KRT86O43790 486 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 TTC19Q6DKK2 380 aaPredicted RBP8.89□□□□□ -0.99
SMG1-202ENST00000446231 ALG1Q9BT22 464 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 A0A1W2PQ27 194 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 A0A1W2PQ64 194 aa8.89□□□□□ -0.99
SMG1-202ENST00000446231 A0A1W2PQD8 194 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms