RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
HDAC8-215ENST00000444609 RNF208Q9H0X6 261 aa13.7□□□□□ -0.22
HDAC8-215ENST00000444609 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
HDAC8-215ENST00000444609 IRS2Q9Y4H2 1338 aa13.69□□□□□ -0.22
HDAC8-215ENST00000444609 LACTBP83111 547 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-215ENST00000444609 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
HDAC8-215ENST00000444609 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
HDAC8-215ENST00000444609 KIF22Q14807 665 aa13.68□□□□□ -0.22
HDAC8-215ENST00000444609 TAF1CQ15572 869 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-215ENST00000444609 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
HDAC8-215ENST00000444609 CELF1Q92879 486 aaKnown RBP13.68□□□□□ -0.22
HDAC8-215ENST00000444609 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
HDAC8-215ENST00000444609 ZNF646O15015 1829 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-215ENST00000444609 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
HDAC8-215ENST00000444609 NUP98P52948 1817 aa13.67□□□□□ -0.22
HDAC8-215ENST00000444609 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
HDAC8-215ENST00000444609 PPP1R12BO60237 982 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-215ENST00000444609 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
HDAC8-215ENST00000444609 SGPL1O95470 568 aa13.67□□□□□ -0.22
HDAC8-215ENST00000444609 GRK4P32298 578 aa13.67□□□□□ -0.22
HDAC8-215ENST00000444609 PANK3Q9H999 370 aa13.67□□□□□ -0.22
HDAC8-215ENST00000444609 SYNGAP1Q96PV0 1343 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 SCN9AQ15858 1988 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 MYL6BP14649 208 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 MAFAQ8NHW3 353 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-215ENST00000444609 SNX27Q96L92 541 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
HDAC8-215ENST00000444609 SASH1O94885 1247 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 CAPN2P17655 700 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 MAGEA10P43363 369 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-215ENST00000444609 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 FAM161BQ96MY7 647 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
HDAC8-215ENST00000444609 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-215ENST00000444609 EYSQ5T1H1 3165 aa13.65□□□□□ -0.23
HDAC8-215ENST00000444609 TLR2O60603 784 aa13.64□□□□□ -0.23
HDAC8-215ENST00000444609 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
HDAC8-215ENST00000444609 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
HDAC8-215ENST00000444609 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
HDAC8-215ENST00000444609 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
HDAC8-215ENST00000444609 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-215ENST00000444609 UBXN2AP68543 259 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 C7orf61Q8IZ16 206 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 CDX2Q99626 313 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-215ENST00000444609 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
HDAC8-215ENST00000444609 TAF1P21675 1872 aa13.63□□□□□ -0.23
HDAC8-215ENST00000444609 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 UFL1O94874 794 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 TFRCP02786 760 aaKnown RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 HOXD10P28358 340 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 CTGFP29279 349 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 MMP14P50281 582 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 MCM10Q7L590 875 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 ANKRD13AQ8IZ07 590 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 OPTNQ96CV9 577 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 PAWRQ96IZ0 340 aaKnown RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-215ENST00000444609 LAMB1P07942 1786 aa13.62□□□□□ -0.23
HDAC8-215ENST00000444609 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 CCL15-CCL14A0A0B4J2E2 113 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 SYN1P17600 705 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 IREB2P48200 963 aaKnown RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 RPS8P62241 208 aaKnown RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 CCL15Q16663 113 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 SUPT20HL1Q3ZLR7 823 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 DACT2Q5SW24 774 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 ZBED3Q96IU2 234 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 SSC5DA1L4H1 1573 aa13.61□□□□□ -0.23
HDAC8-215ENST00000444609 COL1A1P02452 1464 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-215ENST00000444609 OSBPP22059 807 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 PSMC4P43686 418 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 NECAB2Q7Z6G3 386 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 HELBQ8NG08 1087 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-215ENST00000444609 PRUNE2Q8WUY3 3088 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
HDAC8-215ENST00000444609 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 ANKIB1Q9P2G1 1089 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
HDAC8-215ENST00000444609 GTF2A2P52657 109 aa13.59□□□□□ -0.23
HDAC8-215ENST00000444609 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms