RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-208ENST00000444533 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
SSBP3-208ENST00000444533 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 GPC2Q8N158 579 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
SSBP3-208ENST00000444533 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
SSBP3-208ENST00000444533 C15orf52Q6ZUT6 534 aaKnown RBP17.41■□□□□ 0.38
SSBP3-208ENST00000444533 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
SSBP3-208ENST00000444533 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-208ENST00000444533 HIBADHP31937 336 aaKnown RBP17.4■□□□□ 0.38
SSBP3-208ENST00000444533 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
SSBP3-208ENST00000444533 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
SSBP3-208ENST00000444533 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SSBP3-208ENST00000444533 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
SSBP3-208ENST00000444533 RAD17O75943 681 aa17.39■□□□□ 0.37
SSBP3-208ENST00000444533 TFCP2Q12800 502 aa17.39■□□□□ 0.37
SSBP3-208ENST00000444533 C16orf71Q8IYS4 520 aaPredicted RBP17.39■□□□□ 0.37
SSBP3-208ENST00000444533 VGLL2Q8N8G2 317 aa17.39■□□□□ 0.37
SSBP3-208ENST00000444533 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
SSBP3-208ENST00000444533 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
SSBP3-208ENST00000444533 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 SNAP23O00161 211 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 RAB11FIP3O75154 756 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
SSBP3-208ENST00000444533 CXCL9Q07325 125 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
SSBP3-208ENST00000444533 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
SSBP3-208ENST00000444533 NEFLP07196 543 aa17.37■□□□□ 0.37
SSBP3-208ENST00000444533 VEGFAP15692 232 aaPredicted RBP17.37■□□□□ 0.37
SSBP3-208ENST00000444533 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
SSBP3-208ENST00000444533 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
SSBP3-208ENST00000444533 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
SSBP3-208ENST00000444533 FGFR2P21802 821 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 RPS12P25398 132 aaKnown RBP17.36■□□□□ 0.37
SSBP3-208ENST00000444533 KLRK1P26718 216 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 GYG1P46976 350 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
SSBP3-208ENST00000444533 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 APBB1O00213 710 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 PSMD14O00487 310 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
SSBP3-208ENST00000444533 FAM84BQ96KN1 310 aaPredicted RBP17.35■□□□□ 0.37
SSBP3-208ENST00000444533 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 MYO3BQ8WXR4 1341 aa17.35■□□□□ 0.37
SSBP3-208ENST00000444533 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 H7C1D1 291 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 IL1R1P14778 569 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 L3MBTL3Q96JM7 780 aaPredicted RBP17.34■□□□□ 0.37
SSBP3-208ENST00000444533 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
SSBP3-208ENST00000444533 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
SSBP3-208ENST00000444533 COL4A5P29400 1685 aa17.33■□□□□ 0.37
SSBP3-208ENST00000444533 SASH1O94885 1247 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 VIL1P09327 827 aaKnown RBP17.33■□□□□ 0.36
SSBP3-208ENST00000444533 BCAMP50895 628 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 TIMM10P62072 90 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 GTF2IP78347 998 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
SSBP3-208ENST00000444533 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 CCDC158Q5M9N0 1113 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.36
SSBP3-208ENST00000444533 FBXO33Q7Z6M2 555 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 OGFOD1Q8N543 542 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
SSBP3-208ENST00000444533 GMPSP49915 693 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-208ENST00000444533 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-208ENST00000444533 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
SSBP3-208ENST00000444533 RHPN1Q8TCX5 695 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 DPF2Q92785 391 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 LRRCC1Q9C099 1032 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 HDAC9Q9UKV0 1011 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
SSBP3-208ENST00000444533 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 SEMA3EO15041 775 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
SSBP3-208ENST00000444533 MMP14P50281 582 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 DENND2AQ9ULE3 1009 aa17.31■□□□□ 0.36
SSBP3-208ENST00000444533 ZNF609O15014 1411 aa17.3■□□□□ 0.36
SSBP3-208ENST00000444533 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
SSBP3-208ENST00000444533 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-208ENST00000444533 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
SSBP3-208ENST00000444533 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms