RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 HTRA3P83110 453 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 PTPN12Q05209 780 aaKnown RBP27.38■■□□□ 1.97
TRAF4-205ENST00000444415 VGLL2Q8N8G2 317 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 DPF2Q92785 391 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 ADARB2Q9NS39 739 aaKnown RBP27.38■■□□□ 1.97
TRAF4-205ENST00000444415 CNOT7Q9UIV1 285 aaKnown RBP27.38■■□□□ 1.97
TRAF4-205ENST00000444415 ITGBL1O95965 494 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-205ENST00000444415 EGFRP00533 1210 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 USP50Q70EL3 339 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-205ENST00000444415 MICALL2Q8IY33 904 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 GMLQ99445 158 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 COA1Q9GZY4 146 aa27.38■■□□□ 1.97
TRAF4-205ENST00000444415 PLIN1O60240 522 aa27.37■■□□□ 1.97
TRAF4-205ENST00000444415 MAP1SQ66K74 1059 aaPredicted RBP27.37■■□□□ 1.97
TRAF4-205ENST00000444415 PASKQ96RG2 1323 aa27.37■■□□□ 1.97
TRAF4-205ENST00000444415 G3V3G9 751 aa27.36■■□□□ 1.97
TRAF4-205ENST00000444415 KCNJ4P48050 445 aa27.36■■□□□ 1.97
TRAF4-205ENST00000444415 DCAF8Q5TAQ9 597 aa27.36■■□□□ 1.97
TRAF4-205ENST00000444415 RPS12P25398 132 aaKnown RBP27.35■■□□□ 1.97
TRAF4-205ENST00000444415 APLP1P51693 650 aa27.35■■□□□ 1.97
TRAF4-205ENST00000444415 DACT2Q5SW24 774 aa27.35■■□□□ 1.97
TRAF4-205ENST00000444415 RSBN1LQ6PCB5 846 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-205ENST00000444415 MXD3Q9BW11 206 aa27.35■■□□□ 1.97
TRAF4-205ENST00000444415 USP17L3A6NCW0 530 aa27.34■■□□□ 1.97
TRAF4-205ENST00000444415 USP17L4A6NCW7 530 aa27.34■■□□□ 1.97
TRAF4-205ENST00000444415 USP17L1Q7RTZ2 530 aa27.34■■□□□ 1.97
TRAF4-205ENST00000444415 CD209Q9NNX6 404 aa27.34■■□□□ 1.97
TRAF4-205ENST00000444415 CLEC11AQ9Y240 323 aa27.34■■□□□ 1.97
TRAF4-205ENST00000444415 GNAI3P08754 354 aa27.33■■□□□ 1.97
TRAF4-205ENST00000444415 MROH5Q6ZUA9 1318 aa27.33■■□□□ 1.97
TRAF4-205ENST00000444415 ATG9AQ7Z3C6 839 aa27.33■■□□□ 1.97
TRAF4-205ENST00000444415 SAMD7Q7Z3H4 446 aa27.33■■□□□ 1.97
TRAF4-205ENST00000444415 POLR2AP24928 1970 aaKnown RBP27.33■■□□□ 1.97
TRAF4-205ENST00000444415 UBE4AQ14139 1066 aa27.32■■□□□ 1.96
TRAF4-205ENST00000444415 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
TRAF4-205ENST00000444415 CNTROBQ8N137 903 aa27.32■■□□□ 1.96
TRAF4-205ENST00000444415 PA2G4Q9UQ80 394 aaKnown RBP27.32■■□□□ 1.96
TRAF4-205ENST00000444415 EYA2O00167 538 aa27.31■■□□□ 1.96
TRAF4-205ENST00000444415 MTX1Q13505 466 aa27.31■■□□□ 1.96
TRAF4-205ENST00000444415 STRIP1Q5VSL9 837 aa27.31■■□□□ 1.96
TRAF4-205ENST00000444415 AGBL3Q8NEM8 1001 aa27.31■■□□□ 1.96
TRAF4-205ENST00000444415 PGAP2Q9UHJ9 254 aa27.31■■□□□ 1.96
TRAF4-205ENST00000444415 PDE8BO95263 885 aa27.3■■□□□ 1.96
TRAF4-205ENST00000444415 IL1R1P14778 569 aa27.3■■□□□ 1.96
TRAF4-205ENST00000444415 FMR1Q06787 632 aaKnown RBP eCLIP27.3■■□□□ 1.96
TRAF4-205ENST00000444415 METTL24Q5JXM2 366 aa27.3■■□□□ 1.96
TRAF4-205ENST00000444415 DNAJC5GQ8N7S2 189 aa27.3■■□□□ 1.96
TRAF4-205ENST00000444415 H7C1D1 291 aa27.29■■□□□ 1.96
TRAF4-205ENST00000444415 ZNF280AP59817 542 aaPredicted RBP27.29■■□□□ 1.96
TRAF4-205ENST00000444415 TBC1D10BQ4KMP7 808 aaPredicted RBP27.29■■□□□ 1.96
TRAF4-205ENST00000444415 FGFR2P21802 821 aa27.28■■□□□ 1.96
TRAF4-205ENST00000444415 GYG1P46976 350 aa27.28■■□□□ 1.96
TRAF4-205ENST00000444415 PANK1Q8TE04 598 aa27.28■■□□□ 1.96
TRAF4-205ENST00000444415 FAM84BQ96KN1 310 aaPredicted RBP27.28■■□□□ 1.96
TRAF4-205ENST00000444415 SIL1Q9H173 461 aa27.28■■□□□ 1.96
TRAF4-205ENST00000444415 TRPM7Q96QT4 1865 aa27.27■■□□□ 1.96
TRAF4-205ENST00000444415 GTF2IP78347 998 aa27.27■■□□□ 1.96
TRAF4-205ENST00000444415 FTSJ3Q8IY81 847 aaKnown RBP27.27■■□□□ 1.96
TRAF4-205ENST00000444415 COPRSQ9NQ92 184 aa27.27■■□□□ 1.96
TRAF4-205ENST00000444415 RCAN3Q9UKA8 241 aa27.27■■□□□ 1.96
TRAF4-205ENST00000444415 GNAI2P04899 355 aa27.26■■□□□ 1.95
TRAF4-205ENST00000444415 TTLL5Q6EMB2 1281 aa27.26■■□□□ 1.95
TRAF4-205ENST00000444415 CERS5Q8N5B7 392 aa27.26■■□□□ 1.95
TRAF4-205ENST00000444415 HDAC5Q9UQL6 1122 aa27.26■■□□□ 1.95
TRAF4-205ENST00000444415 ASTN2O75129 1339 aaPredicted RBP27.26■■□□□ 1.95
TRAF4-205ENST00000444415 ARAP2Q8WZ64 1704 aa27.26■■□□□ 1.95
TRAF4-205ENST00000444415 PNMA6EA0A0J9YXQ4 647 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 ZBTB7BO15156 539 aaPredicted RBP27.25■■□□□ 1.95
TRAF4-205ENST00000444415 CIAO1O76071 339 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 ZNF804AQ7Z570 1209 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 FBXW7Q969H0 707 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 TRAF5O00463 557 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 SRGAP3O43295 1099 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 ITPRIPQ8IWB1 547 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 FBXO3Q9UK99 471 aa27.25■■□□□ 1.95
TRAF4-205ENST00000444415 KIF4BQ2VIQ3 1234 aa27.24■■□□□ 1.95
TRAF4-205ENST00000444415 RBM26Q5T8P6 1007 aaKnown RBP27.24■■□□□ 1.95
TRAF4-205ENST00000444415 FBXO33Q7Z6M2 555 aa27.24■■□□□ 1.95
TRAF4-205ENST00000444415 TDRD7Q8NHU6 1098 aaKnown RBP27.24■■□□□ 1.95
TRAF4-205ENST00000444415 ZC3H15Q8WU90 426 aaKnown RBP27.24■■□□□ 1.95
TRAF4-205ENST00000444415 C1orf115Q9H7X2 142 aa27.24■■□□□ 1.95
TRAF4-205ENST00000444415 JAG2Q9Y219 1238 aa27.24■■□□□ 1.95
TRAF4-205ENST00000444415 USP17L8P0C7I0 530 aa27.23■■□□□ 1.95
TRAF4-205ENST00000444415 GLIS2Q9BZE0 524 aaPredicted RBP27.23■■□□□ 1.95
TRAF4-205ENST00000444415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.23■■□□□ 1.95
TRAF4-205ENST00000444415 PUM3Q15397 648 aaKnown RBP27.22■■□□□ 1.95
TRAF4-205ENST00000444415 DLK2Q6UY11 383 aa27.22■■□□□ 1.95
TRAF4-205ENST00000444415 MYO3BQ8WXR4 1341 aa27.22■■□□□ 1.95
TRAF4-205ENST00000444415 HIBADHP31937 336 aaKnown RBP27.21■■□□□ 1.95
TRAF4-205ENST00000444415 MYOZ2Q9NPC6 264 aa27.21■■□□□ 1.95
TRAF4-205ENST00000444415 CREBZFQ9NS37 354 aa27.2■■□□□ 1.95
TRAF4-205ENST00000444415 MYH13Q9UKX3 1938 aa27.2■■□□□ 1.94
TRAF4-205ENST00000444415 FAM205AQ6ZU69 1335 aa27.2■■□□□ 1.94
TRAF4-205ENST00000444415 SASH1O94885 1247 aa27.19■■□□□ 1.94
TRAF4-205ENST00000444415 IL15P40933 162 aaPredicted RBP27.19■■□□□ 1.94
TRAF4-205ENST00000444415 KIAA0825Q8IV33 1275 aa27.19■■□□□ 1.94
TRAF4-205ENST00000444415 BCAMP50895 628 aa27.19■■□□□ 1.94
TRAF4-205ENST00000444415 IQSEC3Q9UPP2 1182 aaPredicted RBP27.19■■□□□ 1.94
TRAF4-205ENST00000444415 POLA2Q14181 598 aa27.18■■□□□ 1.94
TRAF4-205ENST00000444415 CST9Q5W186 159 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms