RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 ARHGEF12Q9NZN5 1544 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 TAF3Q5VWG9 929 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 TNPO1Q92973 898 aaKnown RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 CAVIN2O95810 425 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 KCNG4Q8TDN1 519 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 GSDMDP57764 484 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 MCM4P33991 863 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 HOXC9P31274 260 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
FN1-211ENST00000443816 MSANTD4Q8NCY6 345 aa12.8□□□□□ -0.36
FN1-211ENST00000443816 CTAGE1Q96RT6 745 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 GOLGA6L10A0A0M3HER8 536 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 KRT2P35908 639 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 RAB3GAP1Q15042 981 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 WDR66Q8TBY9 1149 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
FN1-211ENST00000443816 UFL1O94874 794 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 SYKP43405 635 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
FN1-211ENST00000443816 FAM13AO94988 1023 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 APBA3O96018 575 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
FN1-211ENST00000443816 TMCO5BA8MYB1 307 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 PUM3Q15397 648 aaKnown RBP12.78□□□□□ -0.36
FN1-211ENST00000443816 NIM1KQ8IY84 436 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 KIF18AQ8NI77 898 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 GOLGA6L9A6NEM1 432 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 DPP8Q6V1X1 898 aaPredicted RBP12.78□□□□□ -0.36
FN1-211ENST00000443816 UBXN4Q92575 508 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 NEO1Q92859 1461 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 H7C1D1 291 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
FN1-211ENST00000443816 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 NUCB1Q02818 461 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
FN1-211ENST00000443816 SBNO1A3KN83 1393 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 NEMFO60524 1076 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 TNNT1P13805 278 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 ATP8B2P98198 1209 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 PRPHP41219 470 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 CCDC184Q52MB2 194 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 PDE8AO60658 829 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 UBE2HP62256 183 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 TEX11Q8IYF3 940 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.36
FN1-211ENST00000443816 FBLN1P23142 703 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
FN1-211ENST00000443816 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 PRPF4BQ13523 1007 aaKnown RBP12.77□□□□□ -0.37
FN1-211ENST00000443816 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.77□□□□□ -0.37
FN1-211ENST00000443816 KDM5CP41229 1560 aa12.77□□□□□ -0.37
FN1-211ENST00000443816 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
FN1-211ENST00000443816 BACH1O14867 736 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
FN1-211ENST00000443816 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 MEIS3Q99687 375 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
FN1-211ENST00000443816 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 FERP16591 822 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
FN1-211ENST00000443816 Q6ZUG5 572 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
FN1-211ENST00000443816 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
FN1-211ENST00000443816 ZCCHC11Q5TAX3 1644 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms