RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 KLRK1P26718 216 aa25.72■■□□□ 1.71
UBE2D4-205ENST00000443780 LDHAL6AQ6ZMR3 332 aa25.72■■□□□ 1.71
UBE2D4-205ENST00000443780 HELBQ8NG08 1087 aaPredicted RBP25.72■■□□□ 1.71
UBE2D4-205ENST00000443780 GLIS2Q9BZE0 524 aaPredicted RBP25.72■■□□□ 1.71
UBE2D4-205ENST00000443780 BRPF1P55201 1214 aaPredicted RBP25.71■■□□□ 1.71
UBE2D4-205ENST00000443780 RBM26Q5T8P6 1007 aaKnown RBP25.71■■□□□ 1.71
UBE2D4-205ENST00000443780 GMLQ99445 158 aa25.71■■□□□ 1.71
UBE2D4-205ENST00000443780 USP44Q9H0E7 712 aa25.71■■□□□ 1.71
UBE2D4-205ENST00000443780 BICC1Q9H694 974 aaKnown RBP25.71■■□□□ 1.71
UBE2D4-205ENST00000443780 SNAP23O00161 211 aa25.7■■□□□ 1.7
UBE2D4-205ENST00000443780 RABL6Q3YEC7 729 aaPredicted RBP25.7■■□□□ 1.7
UBE2D4-205ENST00000443780 CNNM1Q9NRU3 951 aa25.7■■□□□ 1.7
UBE2D4-205ENST00000443780 NOB1Q9ULX3 412 aaKnown RBP25.7■■□□□ 1.7
UBE2D4-205ENST00000443780 PCNTO95613 3336 aa25.7■■□□□ 1.7
UBE2D4-205ENST00000443780 ZNF280AP59817 542 aaPredicted RBP25.69■■□□□ 1.7
UBE2D4-205ENST00000443780 CST9Q5W186 159 aa25.69■■□□□ 1.7
UBE2D4-205ENST00000443780 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
UBE2D4-205ENST00000443780 IRS2Q9Y4H2 1338 aa25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 RASSF10A6NK89 507 aa25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 RARSP54136 660 aaKnown RBP25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 KIF4BQ2VIQ3 1234 aa25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 DACT2Q5SW24 774 aa25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 C15orf52Q6ZUT6 534 aaKnown RBP25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 ANKRD44Q8N8A2 993 aa25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 ABT1Q9ULW3 272 aaKnown RBP25.68■■□□□ 1.7
UBE2D4-205ENST00000443780 USP17L8P0C7I0 530 aa25.67■■□□□ 1.7
UBE2D4-205ENST00000443780 DEFB115Q30KQ5 88 aa25.67■■□□□ 1.7
UBE2D4-205ENST00000443780 STRIP1Q5VSL9 837 aa25.67■■□□□ 1.7
UBE2D4-205ENST00000443780 PLIN1O60240 522 aa25.66■■□□□ 1.7
UBE2D4-205ENST00000443780 VEGFBP49765 207 aa25.66■■□□□ 1.7
UBE2D4-205ENST00000443780 USP48Q86UV5 1035 aa25.66■■□□□ 1.7
UBE2D4-205ENST00000443780 FBXW7Q969H0 707 aa25.66■■□□□ 1.7
UBE2D4-205ENST00000443780 API5Q9BZZ5 524 aaKnown RBP25.66■■□□□ 1.7
UBE2D4-205ENST00000443780 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
UBE2D4-205ENST00000443780 MXD3Q9BW11 206 aa25.65■■□□□ 1.7
UBE2D4-205ENST00000443780 PUS3Q9BZE2 481 aaKnown RBP25.65■■□□□ 1.7
UBE2D4-205ENST00000443780 CD209Q9NNX6 404 aa25.65■■□□□ 1.7
UBE2D4-205ENST00000443780 CELF2O95319 508 aaKnown RBP25.64■■□□□ 1.7
UBE2D4-205ENST00000443780 TTLL5Q6EMB2 1281 aa25.64■■□□□ 1.7
UBE2D4-205ENST00000443780 DCPSQ96C86 337 aaKnown RBP25.64■■□□□ 1.7
UBE2D4-205ENST00000443780 MYO3BQ8WXR4 1341 aa25.63■■□□□ 1.69
UBE2D4-205ENST00000443780 KRT26Q7Z3Y9 468 aa25.63■■□□□ 1.69
UBE2D4-205ENST00000443780 MYOZ2Q9NPC6 264 aa25.63■■□□□ 1.69
UBE2D4-205ENST00000443780 RIPOR2Q9Y4F9 1068 aa25.63■■□□□ 1.69
UBE2D4-205ENST00000443780 GTF2IP78347 998 aa25.62■■□□□ 1.69
UBE2D4-205ENST00000443780 ZNF804AQ7Z570 1209 aa25.62■■□□□ 1.69
UBE2D4-205ENST00000443780 TLL2Q9Y6L7 1015 aa25.62■■□□□ 1.69
UBE2D4-205ENST00000443780 ASTN2O75129 1339 aaPredicted RBP25.62■■□□□ 1.69
UBE2D4-205ENST00000443780 KIF16BQ96L93 1317 aa25.62■■□□□ 1.69
UBE2D4-205ENST00000443780 HSPA1AP0DMV8 641 aaKnown RBP25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 HSPA1BP0DMV9 641 aaKnown RBP25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 SCARF1Q14162 830 aa25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 DLK2Q6UY11 383 aa25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 ARHGAP45Q92619 1136 aa25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 ZNF408Q9H9D4 720 aa25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 GGA3Q9NZ52 723 aa25.61■■□□□ 1.69
UBE2D4-205ENST00000443780 UBE4AQ14139 1066 aa25.6■■□□□ 1.69
UBE2D4-205ENST00000443780 OGFOD1Q8N543 542 aa25.6■■□□□ 1.69
UBE2D4-205ENST00000443780 MROH5Q6ZUA9 1318 aa25.6■■□□□ 1.69
UBE2D4-205ENST00000443780 ADM5C9JUS6 153 aa25.59■■□□□ 1.69
UBE2D4-205ENST00000443780 IL1R1P14778 569 aa25.59■■□□□ 1.69
UBE2D4-205ENST00000443780 WDR33Q9C0J8 1336 aaKnown RBP25.59■■□□□ 1.69
UBE2D4-205ENST00000443780 UBTFL1P0CB47 393 aaPredicted RBP25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 MMP14P50281 582 aa25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 LRRC24Q50LG9 513 aa25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 ANGEL2Q5VTE6 544 aaKnown RBP25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 SAPCD2Q86UD0 394 aa25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 SULF1Q8IWU6 871 aa25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 KLHDC4Q8TBB5 520 aa25.58■■□□□ 1.69
UBE2D4-205ENST00000443780 PAXIP1Q6ZW49 1069 aaPredicted RBP25.56■■□□□ 1.68
UBE2D4-205ENST00000443780 KIAA0825Q8IV33 1275 aa25.56■■□□□ 1.68
UBE2D4-205ENST00000443780 CAPNS2Q96L46 248 aa25.56■■□□□ 1.68
UBE2D4-205ENST00000443780 BCAR3O75815 825 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 ECE1P42892 770 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 RFX5P48382 616 aaPredicted RBP25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 NBPF9Q3BBW0 867 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 METTL24Q5JXM2 366 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 INTS3Q68E01 1043 aaKnown RBP25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 CYP4F22Q6NT55 531 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 PITPNM2Q9BZ72 1349 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 THSD7BQ9C0I4 1608 aa25.55■■□□□ 1.68
UBE2D4-205ENST00000443780 ECM29Q5VYK3 1845 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 GYG1P46976 350 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 CERS5Q8N5B7 392 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 VGLL2Q8N8G2 317 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 HHIPL1Q96JK4 782 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 FAM84BQ96KN1 310 aaPredicted RBP25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 HDAC9Q9UKV0 1011 aa25.54■■□□□ 1.68
UBE2D4-205ENST00000443780 WNT10BO00744 389 aa25.53■■□□□ 1.68
UBE2D4-205ENST00000443780 PDE8BO95263 885 aa25.53■■□□□ 1.68
UBE2D4-205ENST00000443780 HIBADHP31937 336 aaKnown RBP25.53■■□□□ 1.68
UBE2D4-205ENST00000443780 HDAC5Q9UQL6 1122 aa25.53■■□□□ 1.68
UBE2D4-205ENST00000443780 SASH1O94885 1247 aa25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 TRIM27P14373 513 aa25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 FKBP1AP62942 108 aaKnown RBP25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 GRM1Q13255 1194 aa25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 TDRD7Q8NHU6 1098 aaKnown RBP25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 MEIS3Q99687 375 aa25.52■■□□□ 1.68
UBE2D4-205ENST00000443780 GBA2Q9HCG7 927 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms